Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0615 ATGGACTACAAAGGAAACTCTCATAATCACAATGTCACCAATGGTGAAGGCAACAACATCTTCAACAATCTTCCACCGGTTTTGGCGGGACAATCCGGCGAAGGCTTACCTTATGCGCCAGAAAATTTTCCAAATCCCGGTGACATATGGCGGTGGAAAGCTGGTAAGAGGATTTCAAATAATGGTAACTATCGCGACCGTTATTTGTATCTTCCTTGTCATCTTTCCGCCCCTGCAAATCGGACCTCTTACCGGGGCGGATTCACTAGCAAGCTAGCGGTTGAACGCTACATTAAAGAAAAATTCCCTCATATTAATATTCCTGAATTCTTTTCTTCATTCAGTTGGACAATTCCTTCTGGTCTTCCAGCTGATGATTTGTTTCTATGGATGGGATTTGAAGCACGGAAAGAAACCGTAATCCCCTCTGACATTGGTGGATGCAAAGCTGGGAATAAGAATTGCAGCAGCTTGATTTTGGAAAGAGAATGTCCACCTGTCATGCCGTGTGAATTCTGTTGTGCTGAGTCTAAGTTTTGTCGCGAATGTTGCTGCATTCTTTGTAAGAAAGTCATTGATTCAGCTCATGGTGGCTATAGCTTTATCCTGTGTGAAGAAAAACATGGCGATAATATTTGTGGGCATCTCTGTCATCTAGAATGTGCATTTCGAACTTACAAGGCTGGCGCATTGGGGGGAGTTTTTGATTTGGATGCTGAGTATTTTTGTTGGCGCTGTAATGCGAAGACTGAATTGATTTCTCATGTGAATAAGCTTCTACTGGTGTGCGAAGCTATTGATTCAGATGATGATGTCAGGGAAAAAATGTTAAATCTTGGCATTAATCTCTTACGCGGTTCAGAAAAAGTGGCTGCAAAGGAGCTTATGAGTCGAATTGCATTGGCCATGTCTAAGCTCAAACCTGGGACTAATACTGAAGATATCTTGAATGTTGCTGATGAAGTTAGAGCTCATTTTTAA 981 0.42 MDYKGNSHNHNVTNGEGNNIFNNLPPVLAGQSGEGLPYAPENFPNPGDIWRWKAGKRISNNGNYRDRYLYLPCHLSAPANRTSYRGGFTSKLAVERYIKEKFPHINIPEFFSSFSWTIPSGLPADDLFLWMGFEARKETVIPSDIGGCKAGNKNCSSLILERECPPVMPCEFCCAESKFCRECCCILCKKVIDSAHGGYSFILCEEKHGDNICGHLCHLECAFRTYKAGALGGVFDLDAEYFCWRCNAKTELISHVNKLLLVCEAIDSDDDVREKMLNLGINLLRGSEKVAAKELMSRIALAMSKLKPGTNTEDILNVADEVRAHF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0615 326 Pfam PHD - plant homeodomain finger protein 151 279 IPR032881 -
Tpr1g0615 326 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 12 321 - -
Tpr1g0615 326 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 12 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0615 Tpr-Chr1 5132077 5135887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0615 176 303 PHD Gene Family AT3G24440 29.545 8.15e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0615 - - mtr:MTR_1g103600 394.815