Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0614 ATGGAGTCTGACGGAAACTCCGACAATGGCGGTGGAAGCAAACAGTTTTCAAATCTTACGCCGGTGCCGCCGGAAGAATCTGGTGTAGGTTTGCCGTATGCGCCGGAAAATTTTCCGAATCCCGGTGATATTTGGCGGTGGAAAGCTGGTAAGAGGATCTCAAATAACGGTAATTTTCGTGACCGTTATTTATACCTTCCTCCTCGTCTTTCTGCACCTGCCAATCGGACCTCTTTCCGCGGCGGATTTGCTAGCAAGCTCGCCGTTGAACGCTACGTAAGGGAAAGGTTCCCCAAAGCAAATATTTCGGATTTCTTCGCTTCATTCAGCTGGAGAATTCCTTCTGGTCTTCCAGGCAATATGAATCCTGCAGTTGATGAACTTAAACAGTTTGAATTAGAAGAACAGGAAGAATCCAATGTCCCCTGTGACATCGATGGATGCAAAGCTGGGAATCATAAGTGCAGCAGCTTGATTTTGGAAAAAGAATCTCCACCTGTCATGCCGTGTGATTTCTGCTGTGCTGAGCCTAAATTTTGCCGTGAATGTTGCTGCATTCTCTGTTACAAAGCCGTTGATTCAACTCATGGCGGCTGTAGCTATATCATGTGCAAAGTAAAACATGATGATACTATTTGTGGGCATGTCGCTCATCTGGAATGTGCTTTTCGAGCTTACATGGCTGGCACCTTGGGGGGAATGATAGGATTGGATGCTGAGTATTTTTGCCGGCGCTGTAATGGGAGGACCGAACTGATTCCCCATGTTTATAAGCTTCTGCTGACATGCGAATCTATTGATTCAGATGATGTGAAGGAAACTTTTTTAAATCTTGGCATTAATCTCTTACATGGTTCAGAGAAAGCCGCAGCAAAGGAGCTTATGAGTCGAATTGCATTGGCCGTGTCAAAGCTTAAATGTGGGACTAATATTGAAGATATCTTGAATGTTGGTGACAAAGTTACAGCTCATTCTTCAGGTTCCTCTAATAATGGCGAGGCTGCTACAGAAGATGAAAGCCCTTTAAACCCTTCAAATGTTGTAAATGGGACAAATTATTTTCGGTATCGATCCGAGGTGTTAAAAATTGAGGCTGACATTGATCAGGGTCTGGAGGCTCTTAGAAAGTCACAGAAGCATGAATATAAGTTAGCAGAAGAAAACCTTAGGGCACATACAAAATATTTACAAAATCTTCTTCAGCAACTGAACAAAGAGAAGTCTGAATTAGCATGTCAACCGAACACATCTCATTCAAGTGTCTTGTTTCAAACTGTCGAGAAACGAGAGGAACAGCTAAGGCAGGCAATGATTAAATTCGAAGAAATGAAGAAGGTAGTAAATGGTTTTGGCGGCACACCCAAAACTATTTTAGAGAAACACTTTGGTCTATAA 1395 0.4294 MESDGNSDNGGGSKQFSNLTPVPPEESGVGLPYAPENFPNPGDIWRWKAGKRISNNGNFRDRYLYLPPRLSAPANRTSFRGGFASKLAVERYVRERFPKANISDFFASFSWRIPSGLPGNMNPAVDELKQFELEEQEESNVPCDIDGCKAGNHKCSSLILEKESPPVMPCDFCCAEPKFCRECCCILCYKAVDSTHGGCSYIMCKVKHDDTICGHVAHLECAFRAYMAGTLGGMIGLDAEYFCRRCNGRTELIPHVYKLLLTCESIDSDDVKETFLNLGINLLHGSEKAAAKELMSRIALAVSKLKCGTNIEDILNVGDKVTAHSSGSSNNGEAATEDESPLNPSNVVNGTNYFRYRSEVLKIEADIDQGLEALRKSQKHEYKLAEENLRAHTKYLQNLLQQLNKEKSELACQPNTSHSSVLFQTVEKREEQLRQAMIKFEEMKKVVNGFGGTPKTILEKHFGL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0614 464 MobiDBLite consensus disorder prediction 325 346 - -
Tpr1g0614 464 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 13 464 - -
Tpr1g0614 464 Coils Coil 382 409 - -
Tpr1g0614 464 Pfam PHD - plant homeodomain finger protein 151 279 IPR032881 -
Tpr1g0614 464 Coils Coil 426 446 - -
Tpr1g0614 464 MobiDBLite consensus disorder prediction 1 27 - -
Tpr1g0614 464 MobiDBLite consensus disorder prediction 1 22 - -
Tpr1g0614 464 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 13 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0614 Tpr-Chr1 5128516 5132069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0614 176 299 PHD Gene Family AT3G24440 26.562 9.32e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0614 - - mtr:MTR_1g103600 571.622