Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0608 ATGTTTCTCATTGTCTTAACTTGTGCCACAATCTATGTTTTTCTTCGTTCATTCTTAGCAATAATAAAAAAACCAAACTATAAGCTTCCACCAGGACCTACCCCTCTTCCCATCATAGGGAACCTCCTTGAATTAGGTGAAAAGCCACACAAATCATTGGCCAAACTTGCAAAGATTCATGGTCCTATAATGAGTCTCAAGCTTGGTCAAGTAACCACTATTGCCATCTCTTCAGCAGATATGGCAAAAGAGGTTCTTCTAACCAATGATCAGTTTTTGTCAAACAGACCAATTCCTCAATCTGTGTCGGTTCACAACCATGAGCACTTTAGCCTTGCATTCTTACCAGTTTCACCTCTTTGGAAGGAATTGAGAAAAATATGCAACACTCAATTATTTTCTCACAAGACTCTTGATGCCAGCCAAGGCGTTAGGCACAACAAAATGCAGCAGCTCCTCACTGATATCGATCAAAGCAGTCAGATCGGTGAAGCAATAGATATTGGAACAGCGGTGTTCAAGACTACCATAAATCTGTTATCAAACACTATTTTCTCAGTGGATTTGATTCAGTCTAATGGTGAAGCCAGCGAGTTCAAGGACGTGGTAACTGATATTACAAAACATGTTGGCTCACCAAATGTGGCAGATTTTTTCCCTATATTGCAGATGGTTGATCCACAAGGTGTCAAAAGAAAACAGGCAAAGAATGTAAGGAAAGTGTTGGACATCTTTGAAGACTTGATTAACCAGCGTTTGAAGACGAGGGAAGGCTCGTGCGTAGACACCAACAAAGACATGTTAGATGCCATGCTCAACATTTCCAAGGATAATGAGTTTATGGACAAAAATATGATCCAACATCTTGCACATGATCTATTTGTTGCGGGAACAGATACAACAGCATCTACTCTCGAATGGGCGATGACAGAGCTTGTGTGCAACCCAGAAATTATGCTGAAGGCCAAAAGAGAGTTAGAGCAAATGATTGGTTGTGGTGTCCTGCTTGAGGAGTCAGATATTTCTAAGCTCCCATACTTACAAGCAATCATAAAAGAGACACTTCGGTTGCACCCACCAGTGCCATTATTACTACCACGAAAAGCTGAGAGGAACGTTGACATAGGAGGCTACACTATCCCGAAGGACGCGCACGTGCTAATTAATGTGTGGAATATTGGCAGAGATCCCACTATATGGGAGAATCCAACTTTGTTCTCACCAGAAAGGTTCTTGGGGTCCGAGATTGATGTCAAAGGCCGGAATTTTGAGCTTGCACCATTTGGTGCTGGACGACGAATATGCCCTGGCTTACAACTGGCTAATAGGATGCTGCTACTAATGTTGGGGTCACTAGTCAACTCCTTTGATTGGAAGCTTGAAGGTGACATGAAACCAGAAGATATGGACATGGATGATAAATTCGGCATTACCTTGCAAAAGGCACAACCCCTTCAAATTGTTCCTATCAGAATAAGCAAATAA 1485 0.4189 MFLIVLTCATIYVFLRSFLAIIKKPNYKLPPGPTPLPIIGNLLELGEKPHKSLAKLAKIHGPIMSLKLGQVTTIAISSADMAKEVLLTNDQFLSNRPIPQSVSVHNHEHFSLAFLPVSPLWKELRKICNTQLFSHKTLDASQGVRHNKMQQLLTDIDQSSQIGEAIDIGTAVFKTTINLLSNTIFSVDLIQSNGEASEFKDVVTDITKHVGSPNVADFFPILQMVDPQGVKRKQAKNVRKVLDIFEDLINQRLKTREGSCVDTNKDMLDAMLNISKDNEFMDKNMIQHLAHDLFVAGTDTTASTLEWAMTELVCNPEIMLKAKRELEQMIGCGVLLEESDISKLPYLQAIIKETLRLHPPVPLLLPRKAERNVDIGGYTIPKDAHVLINVWNIGRDPTIWENPTLFSPERFLGSEIDVKGRNFELAPFGAGRRICPGLQLANRMLLLMLGSLVNSFDWKLEGDMKPEDMDMDDKFGITLQKAQPLQIVPIRISK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0608 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 493 - -
Tpr1g0608 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Tpr1g0608 494 Gene3D Cytochrome P450 21 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 SUPERFAMILY Cytochrome P450 30 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 493 - -
Tpr1g0608 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 Pfam Cytochrome P450 30 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0608 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0608 Tpr-Chr1 5095258 5097251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0608 3 491 Cytochrome P450 AT2G45550 45.181 1.04e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0608 - - gmx:100807367 727.628