Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0607 ATGTTACTCATTATTGTCTTAACATGTGTCACAATCTATGTTTTTCTTCGGTCATTCTTAGCAATAATCAAAAAACCAAACTATAAGCTTCCACCAGGACCTACCCCTCTTCCCATCATAGGGAACCTCCTTGAATTAGGTGAAAAGCCACACAAATCATTGGCCAAACTTGCAAAGATTCATGGTCCTATAATGAGTCTCAAGCTAGGTCAAGTAACCACTATTGCCATCTCTTCAGCAGATATGGCAAAAGAGGTTCTTCTAACCAATGATCAGTTTTTGTCAAACAGACCAATTCCTCAATCTGTGTCGGTTCACAACCATGAGCACTTTAGTCTTGCATTCTTACCAGTTTCACCTCTTTGGAAGGAATTGAGAAAAATATGCAACACTCAATTATTTTCTCACAAGACTCTTGACGCCAGCCAAGGCGTTAGGCACAACAAAATGCAGCAGCTCCTCACTGATATCGATCAAAGCAGTCAGATCGGTGAAGCAATAGATATTGGAACAGCGGTGTTCAAGACTACCATAAATCTGTTATCAAACACTATTTTCTCAGTGGATTTGATTCAGTCTAATGGTGAAGCCAGCGAGTTCAAGGACGTGGTAACTGATATTACAAAACATGTTGGCTCGCCAAATGTGGCAGATTTTTTCCCTATATTGCAGATGGTTGATCCGCAAGGCATCAAAAGAAAACAGGCAAAGAATGTAAGGAAAGTGTTGGACATATTTGAAGACTTGATTAACCAACGTTTGAAGACGAGGGAAGGCTCGTGTGTAGACACCAACAAAGACATGTTAGATGCTATGCTCAACATTTCTAAGGATAATGAGTTTATGGACAAAAATATGATCCAACATCTAGCACATGATCTATTTGTTGCGGGAACAGATACAACAGCATCTACTCTCGAATGGGCGATGACAGAGCTTGTCTGCAACCCAGAAATTATGCAGAAGGCCAAAAGAGAGTTAGAGCAAATGATTGGTTGCGGTGTCTTACTTGAGGAGTCAGATATATCTAAGCTCCCATACTTACAAGCAATCATTAAAGAGACACTACGGTTGCACCCGCCAGTGCCATTTTTACTACCACGAAAAGCTGAGAGGAATGTTGACATAGGCGGCTACACTATCCCGAAGGACGCGCACGTGCTAATTAATGTGTGGAATATTGGCAGAGATCCCACTATATGGGTGAATCCAACTATGTTCTCACCAGAAAGGTTCTTGGGGTCAGAGATTGATGTCAAAGGCCGGAATTTTGAGCTTGCACCATTCGGTGCTGGACGACGAATATGCCCTGGCTTACAATTGGCTAATAGGATGCTGCTACTAATGTTGGGGTCACTAGTCAACTCCTTTGATTGGAAGCTTGAAGGTGACATGAAACCAGAAGATATGGATATGGATGATAAATTTGGCATTACCTTGCAAAAGGCACAACCCCTTCGAGTTGTTCCCGTAAGAATAAGCAAATAA 1488 0.4167 MLLIIVLTCVTIYVFLRSFLAIIKKPNYKLPPGPTPLPIIGNLLELGEKPHKSLAKLAKIHGPIMSLKLGQVTTIAISSADMAKEVLLTNDQFLSNRPIPQSVSVHNHEHFSLAFLPVSPLWKELRKICNTQLFSHKTLDASQGVRHNKMQQLLTDIDQSSQIGEAIDIGTAVFKTTINLLSNTIFSVDLIQSNGEASEFKDVVTDITKHVGSPNVADFFPILQMVDPQGIKRKQAKNVRKVLDIFEDLINQRLKTREGSCVDTNKDMLDAMLNISKDNEFMDKNMIQHLAHDLFVAGTDTTASTLEWAMTELVCNPEIMQKAKRELEQMIGCGVLLEESDISKLPYLQAIIKETLRLHPPVPFLLPRKAERNVDIGGYTIPKDAHVLINVWNIGRDPTIWVNPTMFSPERFLGSEIDVKGRNFELAPFGAGRRICPGLQLANRMLLLMLGSLVNSFDWKLEGDMKPEDMDMDDKFGITLQKAQPLRVVPVRISK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0607 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 494 - -
Tpr1g0607 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 SUPERFAMILY Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0607 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tpr1g0607 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 494 - -
Tpr1g0607 495 Pfam Cytochrome P450 31 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0607 Tpr-Chr1 5086732 5088728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0607 4 492 Cytochrome P450 AT2G45550 44.779 1.02e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0607 - - gmx:100807367 734.561