Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0573 ATGATGATTCGCGTGATGAAGCTTCTTTCTCGATCTCGCGTCAGGATGCTTGCCGTTGGAGGAGGAGGAGGAGGACATGGCAGCACTGTTAATTTCAACTACCGGAAATGGTCATCTGCATCTTCATCATCATCCGTTCCTCCACTTTCTTCTGAATCGATCAAGGAAGAAGTCTATAAGAGGAACAGCTCCACAACAATAGATGATGACATTGCCGATGCTGCCGATTTTGTAATGGAAGCAAGACATATTTTTCAAGATGAGCCTGAAAAGATTGATGTATTTATGACAGTCCTACACGATTTCCGTGTCGATAGAATTGATTTAAGTGTTGTCAAAGAAGTAATGATGGAGTTGTTGAAAGGGCATAACAATTTAATTTGGAAATTCAATAACCTCCTGCCACCGGGAGAGATCCCACTTCCATTGGATGATGATGGATTACCATTCAAATATGATTCAGCAGCATTCAGAGATTATCAGGAATGA 489 0.4131 MMIRVMKLLSRSRVRMLAVGGGGGGHGSTVNFNYRKWSSASSSSSVPPLSSESIKEEVYKRNSSTTIDDDIADAADFVMEARHIFQDEPEKIDVFMTVLHDFRVDRIDLSVVKEVMMELLKGHNNLIWKFNNLLPPGEIPLPLDDDGLPFKYDSAAFRDYQE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0573 162 PANTHER PROTEIN, PUTATIVE-RELATED 69 156 - -
Tpr1g0573 162 SUPERFAMILY PAH2 domain 67 136 IPR036600 GO:0006355
Tpr1g0573 162 Gene3D Paired amphipathic helix 73 135 IPR036600 GO:0006355
Tpr1g0573 162 ProSiteProfiles PAH domain profile. 67 137 IPR003822 GO:0006355
Tpr1g0573 162 PANTHER SIN3B-RELATED 69 156 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0573 Tpr-Chr1 4767757 4768566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0573 72 152 WRKY Transcription Factor Family AT4G12020 30.864 9.98e-06 42.7