Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0571 ATGGCTTCTTCAACCAAAGAAATAGACAGAGAACTCCCACCTCTTCTCCGTGTCTACAAAGATGGAACAGTTGACCGTTTCCTAGGCTCTCCAATTGTACCACCAATCCCTCTTGATCCAGAAACAGGTGTTTCATCAAAAGACATAGTAATCTCACAAAACCCATTAATCCAAGCTCGTATTCATCTCCCAAAACTCACAAACCAAACACAAAAGCTACCAATTTTAGTTTATTATCATGGTGGTGCTTTTTGTCTTGAATCAGCTTTCTCTTTCCTTCACCAACGTTATCTCAACATTATTGCTTCACAATCAAATGTTATTGTTGTTTCTGTTGAATATAGACTTGCACCAGAACATCCTCTTCCTGCTGCATATGATGATGGTTGGTTTTCTCTCAAATGGGTCACTTCACATTCCATTGAAAACAACAATGACATCATCAATATTGAACCTTGGTTAATCAACCATGGTGATTTTGATAGATTTTACATTGGTGGTGATACTTCAGGTGCAAATATTGCACACAATGCTCTTCTTCGTGTCGGTAATAATGGCGATGAATCTTTACCTGGTGATGTGAAAATCAAAGGAGCATTACTTGCTTTTCCTTTGTTTTGGAGTTCAAAACCAGTTTTATCAGAATCTGTTGAAGAACATGAACAGAGTTCACCGATGAAAGTTTGGAATTTTGTGTATCCTGATGCAGTTGGTGGAATTGATAATCCTTTGATTAATCCTTTGGCAGATGATGCACCTAGTTTGGACAAGATTGGTTGTCCTAAGATTTTGATTTTTGTTGCTGGTAAGGATGATTTAAGAGACAGAGGGATTTGGTACTATGAAGCTGTTAAGAAAAGTGGTTGGAAAGGTGAAGTTGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAAACTCAGAATTCTATTGATATGGTGAATCGTATTGCTTCTTTTCTTGCTTGA 984 0.373 MASSTKEIDRELPPLLRVYKDGTVDRFLGSPIVPPIPLDPETGVSSKDIVISQNPLIQARIHLPKLTNQTQKLPILVYYHGGAFCLESAFSFLHQRYLNIIASQSNVIVVSVEYRLAPEHPLPAAYDDGWFSLKWVTSHSIENNNDIINIEPWLINHGDFDRFYIGGDTSGANIAHNALLRVGNNGDESLPGDVKIKGALLAFPLFWSSKPVLSESVEEHEQSSPMKVWNFVYPDAVGGIDNPLINPLADDAPSLDKIGCPKILIFVAGKDDLRDRGIWYYEAVKKSGWKGEVELVHVEGEEHCFQIYHPETQNSIDMVNRIASFLA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0571 327 SUPERFAMILY alpha/beta-Hydrolases 14 326 IPR029058 -
Tpr1g0571 327 Pfam alpha/beta hydrolase fold 76 306 IPR013094 GO:0016787
Tpr1g0571 327 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 4 326 - -
Tpr1g0571 327 PANTHER ARYLACETAMIDE DEACETYLASE 4 326 - -
Tpr1g0571 327 Gene3D alpha/beta hydrolase 12 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0571 Tpr-Chr1 4745392 4746671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0571 7 326 Carbohydrate Esterase AT3G48700 38.298 2.06e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0571 - K13258 gmx:100785409 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g6120 2 74183158 74184494 Tpr1g0571 1 4745392 4746671 PCT