Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0565 ATGCAAGATTTTTTCGGTTCCATTCGCCGATCCATAGTTTTCCCAACTCCACCCTCACACGCCACCGACGATGGACGACGATTCACCGGAATCGCCAACAAAATTGGTTCCGCCATTCGCAAATCCAGAATCGGCCTCAAGTCTCCACCACCACCACCTCCTCCTCCACCCATCCGGTGGCGGAAAGGTGAATTGATCGGTTCCGGTGCCTTTGGTCGTGTCTACATGGGCATGAACCTTGACTCCGGCGAGCTTATTGCCGTCAAACAGGTTTTGATCGAGCCTGGTTTTGCTTTCAAAGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCTAGAGAGGAAGATTCCTTAAATATTCTGTTGGAGTTTGTACCTGGTGGATCTATCTCGTCACTATTGGGGAAATTCGGATCCTTTCCTGAGTCAGTTATAAGAATGTATACAAAACAGATTTTAGAGGGGCTTGAATACCTTCACAACAACAGAATCATTCACAGGGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGTATTAAACTCGCAGACTTTGGTGCATCCAGGAAAGTCGTGGAATTGGCTACCATGAATGGAACAAAGTCTATGAAGGGTACCCCACACTGGATGTCACCCGAAGTTATTTTACAGACTGGATATACAACCTCTGCTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAAGAGGTTTCGGCTCTTTTCTACATTGGGACAACTAGATCTCATCCACCCATACCGGAACATCTGTCTACTGAGGCAAAGGACTTTTTGCTGAAATGCTTTCACAAGGAACCAGATCTAAGACCTTCTGCATCAGACTTGTTACTGCATCATTTCATCACCTGCGAGTATCAGGAATCTCGTGCAATATCATGCAGTTCAATCAGGGACTCTTGCAATCATATGGCAACAAATGGGATGAGCTCTAGAAACTTTCTGGATTCTATCCAAGGATCAACATGCACAGGCCTAAAGGATGTTCATCAGATGGATAGTTTAAGGTTCTCAACTGTATATCATGCAAATCCTCTAAACGCAGGTTCCTACCAAGGAACAGACAATTATGATGATGACATGTGTCAGATAGATGATAAAGATGATTTCTTGGTTGCTTCATCAGTAAATTCAAAATCCTTACTTGCTGCTGACGACATAAAGAGTTTCAATCCGATGTGTGAACCTGTGGAGGATGACTGGCCTTGCAAGTTTGACGAAACACCAAATTTGAAGAAAAGCAGACTGAACTTGTCCCCAGATCAAACTATTAGGAAAACTATGAGTCCAGAACCATCTCCTAATGCAGATAATGAGTTCTCGTTTTCAAGTGAACCTCTTGGAGTTGAAGATGATGATGAAGTGACAGAGTTCAAAATTAGAGCTTTCCTTGATGATAAGGCCTTTGAACTGAACAAGCTCCAAACACCTCTTTATGAAGAATTCTTTGGGAAATCGAATTCAGCCATTCCTCCTGTGCCTGTTGCAGTTGCACAGAGTAAAGTTATTTCTGATGTCTCAAATGTAACATCAAAAAGCAGGTCTCCTAGTCAAGCTAGACGACGGTTTTCAATGGCTAGCATTGTCAATGTAACAAGCCCTGGGAGTGATCGAAAATATTTTGCGAAGATTAGTGGTGTGACTTCCCAATGTAGACCTTTGCAGGAAATTCAGCCATCTGGGCTTAATGAATCAAAGGAGACTCTTCATGAAGCTGGACTGGAATCATTTAGTGTTAGCTCAAGTTTCTCTGAGAGACAAAGGAAATGGAAAGAAGAACTTGCTGAAGAGCTTGAGCGGACACGAGAGGTGATGCGTCAAACAGGTGGAGGGAAGATAACATCCCCAAAGGATCGCAATTTTCTTAAAGACCGATAG 2001 0.4318 MQDFFGSIRRSIVFPTPPSHATDDGRRFTGIANKIGSAIRKSRIGLKSPPPPPPPPPIRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIEPGFAFKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQILEGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASRKVVELATMNGTKSMKGTPHWMSPEVILQTGYTTSADIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTRSHPPIPEHLSTEAKDFLLKCFHKEPDLRPSASDLLLHHFITCEYQESRAISCSSIRDSCNHMATNGMSSRNFLDSIQGSTCTGLKDVHQMDSLRFSTVYHANPLNAGSYQGTDNYDDDMCQIDDKDDFLVASSVNSKSLLAADDIKSFNPMCEPVEDDWPCKFDETPNLKKSRLNLSPDQTIRKTMSPEPSPNADNEFSFSSEPLGVEDDDEVTEFKIRAFLDDKAFELNKLQTPLYEEFFGKSNSAIPPVPVAVAQSKVISDVSNVTSKSRSPSQARRRFSMASIVNVTSPGSDRKYFAKISGVTSQCRPLQEIQPSGLNESKETLHEAGLESFSVSSSFSERQRKWKEELAEELERTREVMRQTGGGKITSPKDRNFLKDR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0565 666 CDD STKc_MAPKKK 59 323 - -
Tpr1g0565 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Tpr1g0565 666 SMART serkin_6 60 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0565 666 Pfam Protein kinase domain 61 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0565 666 PANTHER MAP KINASE KINASE KINASE 43 562 - -
Tpr1g0565 666 Coils Coil 100 120 - -
Tpr1g0565 666 ProSiteProfiles Protein kinase domain profile. 60 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0565 666 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Tpr1g0565 666 MobiDBLite consensus disorder prediction 643 666 - -
Tpr1g0565 666 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 43 562 - -
Tpr1g0565 666 SUPERFAMILY Protein kinase-like (PK-like) 59 346 IPR011009 -
Tpr1g0565 666 Gene3D Transferase(Phosphotransferase) domain 1 59 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0565 Tpr-Chr1 4692315 4698964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0565 1 655 MAP Kinase Kinase Kinase AT3G06030 55.007 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr1g0565 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0565 - K20606 gmx:100795863 908.672