Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0536 ATGCATATCTTCAAATCCTCAACAATACCAACACAATTGATTCTTGTTTCATCCTTGTTAATTTTACTTACCTTCCCAATTCAAGCTTCTCCAGTATACACTTTCCACGCCTGCACAGACCAGCAACAATCCACCTATTACAAACCAAATTCTAATTTCCAAACCGCTTTAAAAACACTTCTCTCTTCCCTCATCTCAAATTCCACTTTCCACAACGGTTTCTACAACATCCGCATCCCTCTCTTCAATTCCCCCAACGACTTAAAAGGTCTCTTCCTCTGCCGCGCCGACGTTTCTCCCTCCACCTGTCAAAACTGTGTCACCGCCGCAGCTAACAACATCACTAAATTATGCAACAACGAAACTGAGTCTATAATTTGGTATGATGAGTGCTTATTGCGTTACTCTAACACTTCTTTCTTGAATCATATAGTTCCAGCAGGGAACTTGTATTCTGTTGAGAGTATTCCTGATTCTCAAGTTACCCAATTTCGTGATTTTGTTGCAAAGCTTTTGAAGGATTTAGCAAATGAAGCTGTCAATTCTAATTCTGGTCAGAAGAGTTTTGCTGTAAAACAAGATAATTTCTTGGGTTCTATCAAGATATATTCTTTGGCACAGTGTACACCTGATTTGTCCACTTTTGATTGTAACACTTGCTTGCAAAGTGCTATTAGTTCTATTGGAGATTGTTGTAGCTCGAAACGAGGTGCAAGATCGCTTCTTCCAAGTTGTAATATTCGATATGAATCTTATCCGTTTTACAATGTTTCTGCTGTTTCCACTCAACCACAACTTGAATCTCCTTCTTCAGGGAAAAACAATGTTTCTATAATTATTGCAATTGTTGTCCCAATTGTTGTTGCTGTGGTGCTTTTCATTATCGGCTGTTACTTCCTGCGTAAGAGGGCAATCAAGAAGTATAAGTATAATGCTACATTCATCAGGGGGTCTTCTTCAATTCGGAGGGAGGATTTTACTGATATAGAGTGTTTGCAATTTGACTTTACCACAATTGAAGCTGCCACAAATTGCTTCTCCAATGAGAACAAGATTGGCCAAGGTGGATTTGGCGTGGTTTATAAGGGCATTCTTCCTAACAGACAGGAGATAGCTGTGAAGAGGTTGTCGATGACCTCCTTGCAGGGTGCAATAGAGTTCAGGAATGAAGCTTCCCTTGTGGCGAAGCTTCAACATAGAAATTTAGTGAGGATGTTTGGATTTTGTTTGGAAGGGAGGGAGAAGATACTTGTCTACGAATACATAAGAAATAAAAGCCTCGATCACTTTCTATTTGATCCTGTAAAGCAAAGGGAGTTAGATTGGTCAATACGGTACAAGATTATAGTTGGCATCGCTCGAGGGATTCTTTATCTCCATGAAGACTCCCAACTTAGAATTATTCACCGTGATCTCAAAGCTAGCAACGTTCTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGGATGGCAAAAATTTTCCAGGCAGATCAAACTCAAGTAAATACAGGAAGGATAGTTGGGACTTTTGGTTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAGTCAGATGTGTTTAGCTTCGGTGTCCTTGTTTTGGAAATTGTGAGTGGCAAGAAGAATACCGATTTAAATCATTGGAATAACGCTGATGACCTCTTAAGCTATGCATGGAAAAAATGGTCAGAGCAAACACCTTTGGAGTTACTGGATCCAACACTACGAGGTTCTTATTCAAGAAATGAAGTTATCAGATGCATCCATATTGGTTTGTTATGTGTTCAGGAAAATCCACTTGACAGGCCATCCATGGAAACTATTGCACTTATGCTCAACAGTTATTCAGTTACCATGTCATTACCTCAACGGCCACCGTCTCTCCTGCGTGGAAGAACGCCCGACAGAATAAAGCAGGGGCTTGATTCTGATCAGTCCACCACCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACCGAAGTACACCCACGATAA 2016 0.4013 MHIFKSSTIPTQLILVSSLLILLTFPIQASPVYTFHACTDQQQSTYYKPNSNFQTALKTLLSSLISNSTFHNGFYNIRIPLFNSPNDLKGLFLCRADVSPSTCQNCVTAAANNITKLCNNETESIIWYDECLLRYSNTSFLNHIVPAGNLYSVESIPDSQVTQFRDFVAKLLKDLANEAVNSNSGQKSFAVKQDNFLGSIKIYSLAQCTPDLSTFDCNTCLQSAISSIGDCCSSKRGARSLLPSCNIRYESYPFYNVSAVSTQPQLESPSSGKNNVSIIIAIVVPIVVAVVLFIIGCYFLRKRAIKKYKYNATFIRGSSSIRREDFTDIECLQFDFTTIEAATNCFSNENKIGQGGFGVVYKGILPNRQEIAVKRLSMTSLQGAIEFRNEASLVAKLQHRNLVRMFGFCLEGREKILVYEYIRNKSLDHFLFDPVKQRELDWSIRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTFGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDLNHWNNADDLLSYAWKKWSEQTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPLDRPSMETIALMLNSYSVTMSLPQRPPSLLRGRTPDRIKQGLDSDQSTTCSIPWSVNEVSITEVHPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0536 671 Gene3D Phosphorylase Kinase; domain 1 310 421 - -
Tpr1g0536 671 Gene3D - 149 254 IPR038408 -
Tpr1g0536 671 Gene3D - 33 140 IPR038408 -
Tpr1g0536 671 ProSiteProfiles Gnk2-homologous domain profile. 144 254 IPR002902 -
Tpr1g0536 671 CDD STKc_IRAK 352 618 - -
Tpr1g0536 671 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Tpr1g0536 671 Pfam Protein tyrosine and serine/threonine kinase 348 614 IPR001245 GO:0004672|GO:0006468
Tpr1g0536 671 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Tpr1g0536 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Tpr1g0536 671 SUPERFAMILY Protein kinase-like (PK-like) 331 638 IPR011009 -
Tpr1g0536 671 SMART serkin_6 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0536 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 669 - -
Tpr1g0536 671 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0536 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 669 - -
Tpr1g0536 671 Pfam Salt stress response/antifungal 160 252 IPR002902 -
Tpr1g0536 671 Pfam Salt stress response/antifungal 38 137 IPR002902 -
Tpr1g0536 671 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0536 Tpr-Chr1 4512368 4516214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0536 6 671 Receptor kinase-like Gene Family AT4G05200 48.834 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0536 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0536 - - cam:101512516 1025.77