LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g0535	ATGGCAATTGTGATTGTGTCTTGCAAGTTATCATTTTCCTTTTATTATTTTTTTCTCCTACTTGTCATTATTATTGTATCTCAAGCTAAAGCCAAGCCAAATTTTTTGTACAACTTTTGTATAAACGATAATGGCAACTACACAGCCAATAGCACATATCAAACCAACCTCAACATCCTTTTATCCAATCTCTCTTCCAACACACAAATCAACTACGGTTTCTACAATTTCTCTTATGGCCAAAACACTGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCCGATGCTTGCCGCAATTGTCTTAACGATTCAAGAGTTCTTCTGACACGACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGACAATTGCATGTTGCGCTACTCGAACCGATCAATATTTGGCATTATGGAACAATTCCCTTGGTTTCCTATGGAAAACGGTCAGAATGTAACACTAACAGAGGTGGATCAATTTAAAAGAGTTCTTGGGAACTTGATGAAGAAACTGAAAGAAAAAGCTGCGTCAAGTAATGACTCTCGTGTTAAGTATGCTACGGATAATGAATCCAATGTGACCTTGAATTTCCAAACCATATATGGTCTTGTACAGTGTACACCTGATTTATCCTTACAAGATTGCATGGATTGTTTAAATGGTGCTATCTCATATCTTCCAAATAGCAAATTTGGTGGTGGAGTTGTTGAACCAAGTTGTAATATTAGATATGAATCGTGGCGCTTCTACGATCCTCCATTTGTAGTAGTTGACACAGATGAAACCTCTCAACCACAAGAAAAAGGCAAATCATACCATACTACCATTGCCATAGTTGTGCCTGCTGTTGTTGCAGTTCTTGTTCTAAATTTGATCATTTGCATATGCTTGAGGAGAAATCGCCCTAGTATGGCAGGGTTAAATCTCGAAGGCCAAGAGAAAAATGAAGATGAATTTGAAGAAGCTGAAGCGAGTAATGATCTTAAAGTTGGCGATTTGTTGCAATTTGACATGGAAACCATCAAATTAGCTACAAGCAACTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGAACGGTTTATAAGGGTATGCTCTCTAATGGACAAAATGTTGCTATCAAAAGGTTGGCAATCAATTCTAATCAAGGAGAAACCGAATTTAAGAACGAAGTATTGTTGACAGGAAAACTTCAACATCGAAATTTAGTTAAGCTATTAGGTTTCTGCTTACAAAGAAAAGAAAGACTACTGATATATGAGTTTGTCCCTAATAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAATTTGAATTGGGAAAGACGCTACAAAATCATAAAAGATATTGCGCGAGGTCTTCTTTATCTTCATGAAGATTCTCGATTACAAATTATTCACCGTGATCTCAAAATAAGTAATATTCTATTAGATGAAGAGATGAACCCAAAAATTACAGATTTTGGCATTGCAAAATTGTTTGATGCCAATCAAACTCATGGCATGACAAAGACCGTTGTTGGAACATTTGGATATATGGCACCAGAGTACATCAGACATGGAGAATTTTCAGTCAAATCAGATATATTTAGTTATGGCGTAATCATTTTAGAAATTGTTTGTGGTCGGAGAATCATCAAGAATCGTGACGGGGAGAATATAGAGGATCTATTAAGTATTGCATGGAGAAATTGGAAGGCAGGGACAATATCAGATATTGTAGATCCAATATTAGAACAAGGTTTTAATAAGAATGAAAAATTGAGATGCATCCATGTTGGACTACTTTGTGTTCAAGAAGATATAGATATGAGACCATCTATGAGTTTGGTTTTACTAATGCTTAGTAGCATTTATTTTCCACTTCCTGTACCTTTGGAACCTCCCCTTTTAATGCAACCAAAAAGTGCATTATCTACATCGTTAAGGGATCAATATTCAGGTCTCACCAAGTCAACTGATTCAGGATCAGGAAGTCTACTTACTCAAGGATCAACAAGTAAATCTTCAGTTACAGGCCGTTAA	2049	0.3621	MAIVIVSCKLSFSFYYFFLLLVIIIVSQAKAKPNFLYNFCINDNGNYTANSTYQTNLNILLSNLSSNTQINYGFYNFSYGQNTDKVNAIGLCRGDVKPDACRNCLNDSRVLLTRLCPNQKEAIGWYDNCMLRYSNRSIFGIMEQFPWFPMENGQNVTLTEVDQFKRVLGNLMKKLKEKAASSNDSRVKYATDNESNVTLNFQTIYGLVQCTPDLSLQDCMDCLNGAISYLPNSKFGGGVVEPSCNIRYESWRFYDPPFVVVDTDETSQPQEKGKSYHTTIAIVVPAVVAVLVLNLIICICLRRNRPSMAGLNLEGQEKNEDEFEEAEASNDLKVGDLLQFDMETIKLATSNFSDANKLGQGGFGTVYKGMLSNGQNVAIKRLAINSNQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVPNKSLDYIIFDPIKRANLNWERRYKIIKDIARGLLYLHEDSRLQIIHRDLKISNILLDEEMNPKITDFGIAKLFDANQTHGMTKTVVGTFGYMAPEYIRHGEFSVKSDIFSYGVIILEIVCGRRIIKNRDGENIEDLLSIAWRNWKAGTISDIVDPILEQGFNKNEKLRCIHVGLLCVQEDIDMRPSMSLVLLMLSSIYFPLPVPLEPPLLMQPKSALSTSLRDQYSGLTKSTDSGSGSLLTQGSTSKSSVTGR*	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g0535	682	ProSitePatterns	Protein kinases ATP-binding region signature.	358	380	IPR017441	GO:0005524
	Tpr1g0535	682	ProSiteProfiles	Gnk2-homologous domain profile.	144	253	IPR002902	-
	Tpr1g0535	682	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	7	656	-	-
	Tpr1g0535	682	SUPERFAMILY	Protein kinase-like (PK-like)	338	655	IPR011009	-
	Tpr1g0535	682	Gene3D	Phosphorylase Kinase; domain 1	313	427	-	-
	Tpr1g0535	682	Gene3D	-	148	253	IPR038408	-
	Tpr1g0535	682	Gene3D	-	32	137	IPR038408	-
	Tpr1g0535	682	Pfam	Salt stress response/antifungal	40	135	IPR002902	-
	Tpr1g0535	682	Pfam	Salt stress response/antifungal	158	249	IPR002902	-
	Tpr1g0535	682	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Tpr1g0535	682	Gene3D	Transferase(Phosphotransferase) domain 1	428	628	-	-
	Tpr1g0535	682	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	7	656	-	-
	Tpr1g0535	682	SMART	serkin_6	352	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr1g0535	682	MobiDBLite	consensus disorder prediction	657	682	-	-
	Tpr1g0535	682	Pfam	Protein kinase domain	353	562	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr1g0535	682	ProSiteProfiles	Protein kinase domain profile.	352	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr1g0535	682	ProSiteProfiles	Gnk2-homologous domain profile.	35	138	IPR002902	-
	Tpr1g0535	682	CDD	STKc_IRAK	358	626	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g0535	Tpr-Chr1	4506853	4510692	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g0535	16	641	Receptor kinase-like Gene Family	AT4G21410	47.504	0.0	559

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Tpr1g0535		Pkinase	1.6e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g0535	-		-	lang:109353867	712.605