Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0534 ATGGTCATCGCCACCGTTGTAGCAGTTGTTGTGGCTGGCATAGTGCTTGTTGTTTTATGCATTTATTTTGAAAGGAGAAAATCAAGACTAGAATATACGCATGAATTTGAAGGCCAAGAGAAAAATGAAGATGAATTTGAAGCTGAAGCGAGTAATGACCTTAAAGTTGGGGATTTGTTGCAATTTGACTTGGAAACCGTCATATTAGCTACAAACAACTTCTCTGATGCATATAAGCTTGGTCAAGGTGGATTTGGAAGCGTTTACAAGGGTATGCTCCCAGATGGACAAAATGTTGCTATCAAAAGGTTGGCAATCAATTCTAATCAAGGAGAAACCGAATTTAAGAATGAAGTGTTGCTAACAGGGAAGCTTCAACATCGAAATTTAGTTAAGCTATTAGGTTTCTGCTTACAAAGAAAAGAAAGACTACTGATCTACGAGTTTGTCCCTAATATAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAATTAA 504 0.3671 MVIATVVAVVVAGIVLVVLCIYFERRKSRLEYTHEFEGQEKNEDEFEAEASNDLKVGDLLQFDLETVILATNNFSDAYKLGQGGFGSVYKGMLPDGQNVAIKRLAINSNQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVPNISLDYIIFDPIKRAN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0534 167 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 167 - -
Tpr1g0534 167 Pfam Protein kinase domain 76 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0534 167 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Tpr1g0534 167 SUPERFAMILY Protein kinase-like (PK-like) 57 163 IPR011009 -
Tpr1g0534 167 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 167 - -
Tpr1g0534 167 ProSiteProfiles Protein kinase domain profile. 74 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0534 167 Gene3D Phosphorylase Kinase; domain 1 33 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0534 Tpr-Chr1 4487786 4489236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0534 1 166 Receptor kinase-like Gene Family AT4G23190 47.590 5.63e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0534 Pkinase 1.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0534 - - gmx:100787936 192.586