Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0533 ATGCTTTCTTGGCAATGGACTCTGTTTTCACTTCTTCCTCTGTTTTTCACACTAAATTCTGAAGCAAATGACCAACTAGTTTTCCGCTACCACACATGTAACCAAAATCTCGGAAACTTCACCCAAGGTAGTATCTACCAGAACAACCGTGACAACGTTTTGGCACAAATATATTCCAACAAAGAAATAAACTACGGTTTCTACAATGTCTCGTATGGCGAAGAACCTGACAGAGTAAACGCAATCGGTTTATGCAGAGGTGATGTTAATCCAGCCGACTGCCGTGAATGCTTGAGAACCTCCGCTGTACTTCTAACCGAACGATGTCCAATACAGAAAGAAGCAATTGGTTACTACGATTTATGCACCTTACGTTATTCAAACAATTCGCTGTTTGGTGTCATGAAAACCGAAACAGGTTACGTTTATAATATTGAAACCAAGACAGTGGTGGATGATTTGTTTAATCAAACACTTAATGTCTTGTTGGATGAACTTAAAAGCGCGGCCGCGGATGGTGACTCCCAACATAAGTTTGCTGAAAAGAGTGTTAAAGTAAATGATGAAGGTAGTAGTAATAGAAATGAGACTATATATGGTTTGGTTCAGTGTACACCAGATTTGTCTAAGGACAACTGTACTAATTGTTTGGATACAGCTTTGGGACAATTTTCATATTGGTGTAAACAAATGAAAGGTTGTTTGTATCTTGGACCAAGTTGTTCTGTTAGATATGATATCACTCCTTTCTTTGAGTCCATAGTCATGAACAATACAGATTCACCAGCAGGTCCAGCACCACAGCCTTCTCAAGCACTTACTCCTGCACTTTCCCCTAAATCTTCAACTTCTGCTATCTCCATCAACACATCTACGAGTAAAGGAAAGAGCACGAAAATAAGAACGACAATCGCTATCGCTGTAGCAATAGTTGTGGCTGGCATACTATTGGTGGGTTCATGGATTTGTTTGCGAAAGCGAAAACCAAAACCCGAATACACGGCTGAAATTGAAGGCCCAGAGAAAAATGAAGATGAAGTTGATGATGTTGAAGAGGAAGAAGTTGAAGCTGGTAATGACCTTAAAGTTGGGGATTTGTTGCAATTTGACTTTGCAACCATCAGATTAGCTACAAGCAACTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGTTCTGTTTACAAGGGTACGCTCTCTAATGGACAAGATATTGCCATCAAAAGATTGGCTAACAATTCTGAGCAAGGAGAAACCGAATTTAAGAACGAAGTATTGCTGACGGGGAAACTTCAACATCGAAATTTGGTTAAGCTACTAGGTTTCTGCTTACAAAGAAAAGAAAGACTACTGATATATGAGTTTGTCTCCAATAAAAGTCTTGATTATATCATATTTGATCCAATCAAGCGTGCAAGTTTAAATTGGGAAAGACGTTTCAAAATCATAAAAGATATTGCTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGATTACAAATTGTTCATCGTGATCTCAAAACAAGTAACATTCTGCTAGATGAAGAGATGAATCCAAAAATTACGGATTTTGGCATTGCAAGATTGTTTGATCCAAATCAAACTCATGGCATGACAAAGACCGTCATTGGAACTTATGGATATATGGCACCAGAGTATATTAAACATGGACAATTCTCAGTCAAATCAGATGTATTCAGTTTTGGCGTAATCATTTTAGAAATTATTTGCGGCCAAAGAAACACTGAGATTCAAGATGGGGAGAATATAGAGGATCTATTAGGCATTGTATGGAAAAATTGGAAGGCAGGGACAAGTTTAGACATTGTAGATCCTATATTACACCAAGGTTTTAATAAGAATGAAAAATTGAGATGCATCCATGTTGGATTACTTTGTGTTCAAGAAGATATAGTTGTGCGACCAAATATGAGTTCGGTTTTACTGATGCTTAATAGCACCACTTTCCCACTTTCTGAGCCTTCTGAACCTCCATTTTTAATGCAACCCAAAAGGGCATTATCTATACACTTAAATGAGCAATATTCAGATCCCACAAAGTCAACTGATTCAGGATCAGGAAGTCAACTTACTCAAGGATCAACAAGTAAGTCTTCAGCTATTGTTAAATAA 2136 0.3792 MLSWQWTLFSLLPLFFTLNSEANDQLVFRYHTCNQNLGNFTQGSIYQNNRDNVLAQIYSNKEINYGFYNVSYGEEPDRVNAIGLCRGDVNPADCRECLRTSAVLLTERCPIQKEAIGYYDLCTLRYSNNSLFGVMKTETGYVYNIETKTVVDDLFNQTLNVLLDELKSAAADGDSQHKFAEKSVKVNDEGSSNRNETIYGLVQCTPDLSKDNCTNCLDTALGQFSYWCKQMKGCLYLGPSCSVRYDITPFFESIVMNNTDSPAGPAPQPSQALTPALSPKSSTSAISINTSTSKGKSTKIRTTIAIAVAIVVAGILLVGSWICLRKRKPKPEYTAEIEGPEKNEDEVDDVEEEEVEAGNDLKVGDLLQFDFATIRLATSNFSDANKLGQGGFGSVYKGTLSNGQDIAIKRLANNSEQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRKERLLIYEFVSNKSLDYIIFDPIKRASLNWERRFKIIKDIARGLLYLHEDSRLQIVHRDLKTSNILLDEEMNPKITDFGIARLFDPNQTHGMTKTVIGTYGYMAPEYIKHGQFSVKSDVFSFGVIILEIICGQRNTEIQDGENIEDLLGIVWKNWKAGTSLDIVDPILHQGFNKNEKLRCIHVGLLCVQEDIVVRPNMSSVLLMLNSTTFPLSEPSEPPFLMQPKRALSIHLNEQYSDPTKSTDSGSGSQLTQGSTSKSSAIVK* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0533 711 MobiDBLite consensus disorder prediction 332 352 - -
Tpr1g0533 711 MobiDBLite consensus disorder prediction 680 711 - -
Tpr1g0533 711 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 680 - -
Tpr1g0533 711 CDD STKc_IRAK 387 653 - -
Tpr1g0533 711 MobiDBLite consensus disorder prediction 679 711 - -
Tpr1g0533 711 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Tpr1g0533 711 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Tpr1g0533 711 ProSiteProfiles Protein kinase domain profile. 381 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0533 711 Pfam Protein kinase domain 382 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0533 711 ProSiteProfiles Gnk2-homologous domain profile. 136 250 IPR002902 -
Tpr1g0533 711 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 680 - -
Tpr1g0533 711 Gene3D Transferase(Phosphotransferase) domain 1 457 659 - -
Tpr1g0533 711 Gene3D Phosphorylase Kinase; domain 1 343 456 - -
Tpr1g0533 711 Gene3D - 140 250 IPR038408 -
Tpr1g0533 711 Gene3D - 25 131 IPR038408 -
Tpr1g0533 711 SMART serkin_6 381 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0533 711 SUPERFAMILY Protein kinase-like (PK-like) 367 682 IPR011009 -
Tpr1g0533 711 Pfam Salt stress response/antifungal 152 246 IPR002902 -
Tpr1g0533 711 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Tpr1g0533 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0533 Tpr-Chr1 4467452 4476592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0533 38 670 Receptor kinase-like Gene Family AT4G21410 45.000 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0533 Pkinase 6.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0533 - - gmx:100787936 719.153