Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0526 ATGGCTCTGTTTCTCTTTCTCTGTTTTTTGTTTTCTATAATTGTATCCCAAGCCAAAGCAGGTGATCCTGTTTACTGTGATAGCAGTAGAGGAAACTACACAACCAATAGCATTTATGACAACAACCTTAAAACCGTTTTATCCAGTTTCTATTCCCATACAGAAATTAACTATGGATTCTACAATTTCTCATATGGCCAAGACCCCGACAAAGCATACGCCATTGGGGTGTGTCGTGGAGATGTTAAGCCAAATGATTGTCGTAGAAACCTAAACAATTCCATTGGCTATCTCAGAGAGCAGTGTCCAAACCAAAAAGAGGCAATTGTGTGGGCTGGTGATAATACTTTGTGGTACTCAAGTCGCTCAATTTTTGGGATCGTGGAAACTAATCCTACACAATATTTGATTTATGAAAGAGATGCAAGTAATGCGGATGAGTACCCTCAAGCACTGAGTAATTTGATGGGATATCTACTATTCATAGCTGCATCAGGAGACTCGCGCCAAAAGTACGCCGCAGATAGTTTGACTTTGAATGACCCTGCAAACTTTGCAACTATATACGCTTATGTGCAGTGTATGCCTGATTTGTCACAGCAAGAATGCACTACCTGTTTGTTTCATCCTATCTCAGAAATCCAAAAGTGTTGTAATGGGAGGATGGGAGGAAATATTTTTAAACCAAGTTGTCGTATAAGATTTGAACCTTATCGCTTCTTCAATTCCACGATTTTGTTAGATTCGCCGTCGCTACCACCTTCACCATCCACCAATAACACTTCTTTAGGAAACAACAAAAGACGAACTGTCATCGCCACTGCAGTGCCAATAGTTGCTGTGGTTTTGGTTCTCATTCTTATTTGGATATATTTAAGACATAGAAAGCCAAAAACAAATTATGAAGCTAACATGGGAAAATATGACGATGGAGGTGACGAGGAAATGACTATCGCTGAGTCATTGCAATTTAATTTTGATATCATAAAAGTTGCTACAAGTGATTTCTCCCATTCCAATAAACTTGGACAAGGTGGATTTGGAATTGTTTATCGGGGTAAACTGCCTAATGGACAAATGATTGCTGTCAAAAGGTTGTCAACAAATTCTGACCAAGGTGACGTGGAATTTAAAAATGAAGTAATTTTAGTAGCCAAGCTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTTTGTCTAGAAGGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCCAAATAAAAGTCTTGATTACTTCATATTTGATCCAACAAGAAAAACACAATTGAATTGGGAAACGCGCTACACGATCATAAAAGGTATTGCCCGTGGTATTCTTTATCTTCATGAGGATTCTCGCTTGCGAATTATACACCGTGATCTCAAAGCAAGCAATATTCTCTTAGACGATGAGATGAATCCTAAGATATCTGATTTTGGATTAGCAAGATTGTTTGTTATCGGTCAAACTGAAGGAAGTACAAATAGAATCGTTGGAACCTATGGTTACATGGCACCTGAGTATGCGATGCATGGAGAATTTTCGGTAAAATCAGATGTCTTTAGTTTTGGAGTATTAGTTCTTGAGATTATAACCGGTCATAAAAATAGTGCAAACATTTGTCATGGAGAGGATGTGGAGTATCTATTGACCTATGCATGGAGAAGCTGGAGAGAGGGGAAAGCTATAAATATTATAGATCCATCATTAAGCAACTTTTCACAAGATGAAATAATGAGATGCATCCATATTAGTTTACTCTGTATTCAAGAAAACGTAGTTGACAGACCAACCATGGCTTCTGTTGCACTCATGCTTAATAGTTATTCTCTCGCTCTCTCAATACCTTCGAAACCTGCGTATTTTATGGGAGGTGGAATTGGTAGACTACCAGACATGCAGCAACAAGTTGATAATGTAGGTGCAACAAGATTGGATGAATCGGTGAACCAAATCTCAATTACCGATCCATACCCACGATAG 1986 0.3822 MALFLFLCFLFSIIVSQAKAGDPVYCDSSRGNYTTNSIYDNNLKTVLSSFYSHTEINYGFYNFSYGQDPDKAYAIGVCRGDVKPNDCRRNLNNSIGYLREQCPNQKEAIVWAGDNTLWYSSRSIFGIVETNPTQYLIYERDASNADEYPQALSNLMGYLLFIAASGDSRQKYAADSLTLNDPANFATIYAYVQCMPDLSQQECTTCLFHPISEIQKCCNGRMGGNIFKPSCRIRFEPYRFFNSTILLDSPSLPPSPSTNNTSLGNNKRRTVIATAVPIVAVVLVLILIWIYLRHRKPKTNYEANMGKYDDGGDEEMTIAESLQFNFDIIKVATSDFSHSNKLGQGGFGIVYRGKLPNGQMIAVKRLSTNSDQGDVEFKNEVILVAKLQHRNLVRLLGFCLEGKERLLVYEFVPNKSLDYFIFDPTRKTQLNWETRYTIIKGIARGILYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGLARLFVIGQTEGSTNRIVGTYGYMAPEYAMHGEFSVKSDVFSFGVLVLEIITGHKNSANICHGEDVEYLLTYAWRSWREGKAINIIDPSLSNFSQDEIMRCIHISLLCIQENVVDRPTMASVALMLNSYSLALSIPSKPAYFMGGGIGRLPDMQQQVDNVGATRLDESVNQISITDPYPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0526 661 Pfam Protein kinase domain 337 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0526 661 SUPERFAMILY Protein kinase-like (PK-like) 318 607 IPR011009 -
Tpr1g0526 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Tpr1g0526 661 CDD STKc_IRAK 342 608 - -
Tpr1g0526 661 ProSiteProfiles Protein kinase domain profile. 336 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0526 661 Gene3D Phosphorylase Kinase; domain 1 302 411 - -
Tpr1g0526 661 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 651 - -
Tpr1g0526 661 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Tpr1g0526 661 Pfam Salt stress response/antifungal 144 237 IPR002902 -
Tpr1g0526 661 Pfam Salt stress response/antifungal 26 120 IPR002902 -
Tpr1g0526 661 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Tpr1g0526 661 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 651 - -
Tpr1g0526 661 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Tpr1g0526 661 ProSiteProfiles Gnk2-homologous domain profile. 130 240 IPR002902 -
Tpr1g0526 661 Gene3D - 132 240 IPR038408 -
Tpr1g0526 661 Gene3D - 22 123 IPR038408 -
Tpr1g0526 661 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0526 Tpr-Chr1 4440913 4446170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0526 3 661 Receptor kinase-like Gene Family AT4G21410 48.023 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0526 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0526 - - mtr:MTR_5g065130 955.281