Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0525 ATGGCAATTGTGATTATGTCTTGCAAGTTATCATTTTCCATTTATTCTTTTCTCCTTCTTCTCATTATTGTTGTATCTCCAACAAAAGGCCAGCCAAATTTTTTGTACAACTTTTGTATGAACGATAATGGCAACTACACAGCCAATAGCACATATCAAACCAACCTCAACATCCTTTTGTCCAATCTCTCTTCCAACACACAAATCAACTACGGCTTCTACAATTTCACTTATGGCCAAAATACCGACAAAGTAAACGCCATTGGACTCTGCAGAGGAGATGTTAAACCCGATGCTTGCCGCAATTGTCTTAACAATTCAAGAGTTCTTCTAACAAGACTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGACAGCTGCATGTTGCGCTACTCCAACCGATCAATATTTGGCATTATGGAAGGCTTACCTTCGTTTTTCATGTCAAACAGTAATAATGTAACACAGGTGGATCAATTTAATCAAGTTCTTGGAAACTTGATGAAGACACTGAAAGAAAAAGCTGCATCAAGTAATGACTCTCGTATTAAGTATGCTACGGGTAATGAAACTGGCGTGAACTTGAATTTTCAAACCGTATATGGTCTTGTGCAGTGTACACCTGATTTACCATTTCAAGAATGCACGCGTTGTTTAGATGATGCTATCTATAAAATTCCAAGTTGTTGTAATAACAAGATGGGTGGTAGAGTTATTAAACCAAGTTGTAGTATTAGATTTGAATCATCTCTCTTCTACGATGCTCCACTTATAGCAGACACAGATGAAACCTCACCACCACGACCACAAGAAAAAAGCAAATCATCTCATACTACTACCATTGCCATAGTTGTGCCTGTCGTTGTAGTTCTTGTTCTGCTAACTTTGATCATTTGCATACGCTTAAGAAGAAATCGCCATAGTATGGCAGCTGGGTCAAATCTCGAAGAAATAGAAGATGATGATGATATTGAAATTGCTGAGTCATTGCAATTCAACTTTGACACAATTGTAGTTGCTACAAATAACTTTTCCGAAGCTAATAAACTAGGACATGGCGGATTTGGAGTTGTTTATCACGGTAAACTCTCGAGTGGACAAGTGATTGCGGTCAAAAGATTGTCAATAGATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTATTGGCTAAGCTTCAACATCGAAATTTAGTCAAACTACTTGGTTTTTGTCTAGAAGGAAAAGAAAGGCTACTTATCTATGAATTTGTTCCTAACAAAAGCCTTGATTACTTTATATTTGATCCAATAAAGAAAGCACAATTAGATTGGGCAATGCGCTACAAAATCATTGGAGGTATTGCTAGAGGACTTCTTTACTTGCACGAGGATTCTCGACTTCGTATTATACATCGTGATCTTAAATCAGGTAACATTCTCTTGGACGAAGACATGAATGCTAAAATATCAGATTTTGGGATGGCCAGGCTGCTACTTGTTGATCAAACTCAAGTAAATACAAATAAAGTCGTTGGAACATATGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCGGTAAAATCAGATGTTTTTAGTTTTGGCGTACTAGTTTTGGAGATTATAAGTGGACAAAAAATTAGTCGCTTTCTTGATGGACAGAGTCAGGAGGATTTACTTAGCTTTGCATGGAGAAACTGGAGGGAGGGAACAATCACGAATATAATAGATCCATCATTAAACAACGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGACTACTTTGTGTTCAGGAAAATTTGGTTGAAAGACCAACTATGGCAACCATTGCACTGATGCTTAGTAGTTATTCTTTCACTATGCCTCTACCTTTGGAGCCTGCATCTTCCATCGGCGGAAGAACTACAAGCCTTCCATAA 1923 0.3723 MAIVIMSCKLSFSIYSFLLLLIIVVSPTKGQPNFLYNFCMNDNGNYTANSTYQTNLNILLSNLSSNTQINYGFYNFTYGQNTDKVNAIGLCRGDVKPDACRNCLNNSRVLLTRLCPNQKEAIGWYDSCMLRYSNRSIFGIMEGLPSFFMSNSNNVTQVDQFNQVLGNLMKTLKEKAASSNDSRIKYATGNETGVNLNFQTVYGLVQCTPDLPFQECTRCLDDAIYKIPSCCNNKMGGRVIKPSCSIRFESSLFYDAPLIADTDETSPPRPQEKSKSSHTTTIAIVVPVVVVLVLLTLIICIRLRRNRHSMAAGSNLEEIEDDDDIEIAESLQFNFDTIVVATNNFSEANKLGHGGFGVVYHGKLSSGQVIAVKRLSIDSGQGDIEFKNEVLLLAKLQHRNLVKLLGFCLEGKERLLIYEFVPNKSLDYFIFDPIKKAQLDWAMRYKIIGGIARGLLYLHEDSRLRIIHRDLKSGNILLDEDMNAKISDFGMARLLLVDQTQVNTNKVVGTYGYMAPEYAMFGQFSVKSDVFSFGVLVLEIISGQKISRFLDGQSQEDLLSFAWRNWREGTITNIIDPSLNNGSQNEIMRCIHIGLLCVQENLVERPTMATIALMLSSYSFTMPLPLEPASSIGGRTTSLP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0525 640 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Tpr1g0525 640 CDD STKc_IRAK 351 615 - -
Tpr1g0525 640 ProSiteProfiles Gnk2-homologous domain profile. 143 253 IPR002902 -
Tpr1g0525 640 SUPERFAMILY Protein kinase-like (PK-like) 330 615 IPR011009 -
Tpr1g0525 640 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 639 - -
Tpr1g0525 640 Gene3D Transferase(Phosphotransferase) domain 1 421 622 - -
Tpr1g0525 640 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0525 640 Gene3D Phosphorylase Kinase; domain 1 309 420 - -
Tpr1g0525 640 SMART serkin_6 345 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0525 640 Pfam Protein tyrosine and serine/threonine kinase 348 612 IPR001245 GO:0004672|GO:0006468
Tpr1g0525 640 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Tpr1g0525 640 Gene3D - 146 253 IPR038408 -
Tpr1g0525 640 Gene3D - 32 136 IPR038408 -
Tpr1g0525 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Tpr1g0525 640 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Tpr1g0525 640 Pfam Salt stress response/antifungal 153 250 IPR002902 -
Tpr1g0525 640 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0525 Tpr-Chr1 4429111 4440350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0525 42 629 Receptor kinase-like Gene Family AT4G21410 52.131 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0525 PK_Tyr_Ser-Thr 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0525 - - gmx:113000773 780.785