Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0524 ATGGCAATTGTGATTGTATCTTGCAAGTTATCATTTTCTTTTTATTATTTTCTCCTTCTTCTCATTATTATTGTATCTCAAGCTAAAGCCCAGCAAAATTTTTTGGACCACTTTTGTATGAACGAAAAAGGTAACTACACAGCCAATAGCACATATCAAAACAACCTTAACATCCTTTTATCCGATCTCTCTACCAACACACAAATCAACTACGGTTTCTACAATTTCTCTAATGGCCAAAAAACCAACAAAGTATACGCCATTGGACTCTGCAGAGGAGATGTTAAACCCGATATTTGCCGCAGTTGTCTCAACGATGCAAGAGTTCTTCTAACACGTCTATGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGACAATTGTATGTTGCGCTACTCCAACCGATCAATATTTGGCATTATGGAAGGTTCACCTTCGTTTTACATTTTAAGCTTTAAAAATGTAACACGGGCGGATCAATTTAATCGAGTTCTTGGGAACTTGCTGATTAAATTGAAAGAAAAAGCTGCATCAAGTAATGACTCTCGTGTTAAGTATGCCACGGGTAATGAAACTGGCTTGAACTTTCAAACCATATATGGTCTTGTGCAGTGTACACCTGATTTGTCATTTCAAGATTGCAATAGTTGCTTAGATGCTGCTATCTCAGAAATTCCAAGTAAGGTTGGTGCTGGACTTGTTACACCAAGTTGTAAGATTGAATTTGAAACCTTTCTCTTCTACGATCCTCCGCTTATAGTAGACACAGATGAAACCTCTCAACCACAAGAAAAAAGCAAATCATCTAATACTACCACCATTGCCATAGTTGTGCCTACTGTTGTTGTAGTTCTTGTTCTGCTAACTTTGATCATTTGTATATGCTTAAGGAGAAACCGCCACAGTATGGCAGGGTTAAATATCGAAGGTGAAGAGGAAATGACGATTGCCGAGTCATTGCAATTTAATTTTGATATCATACGAGTTGCTACAAATGATTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAATTGTTTATCAGGGTAAATTGCCTAATGGACAAGTAATTGCTGTCAAAAGATTGTCAACAAATTCTAACCAAGGAGACACGGAATTTAAAAATGAAGTACTTTTAGTGGCGAAGCTTCAACATCGAAATTTAGTTAGGCTACTTGGTTTTTGTCTTGAAAGAAGAGAAAGGCTACTTGTTTATGAATTTGTTCCAAATAAAAGTCTTGATTACTTCATATTTGATCTAACAAGGAAAACACAATTGAAATGGGAGAAGCGCTACAATATCATAAAAGGTATTGCCCGTGGTATTCTTTATCTTCATGAGGATTCTCGCTTGCGAATTATACACCGTGATCTCAAAGCAAGCAATATTCTCTTAGACGACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTTTGTTATCGGTCAAACTGAAGGAAGCACAAATAGAATCGTTGGAACCTATGGATATATGGCACCTGAGTATGCGATGCATGGGGAATTTTCAGTAAAATCAGATGTCTTTAGTTTTGGAGTATTAGTTCTTGAGATTATAAGCGGTCATAAAAATAGTGCAAACATTTGTCATGGGGAGGATGTGGAGTATCTATTGACCTATGCATGGAGAAGCTGGAGAGAGGGGCAAGCTATAAATATTATAGATCCATCATTAAGCAACTTTTCAGTAAATGAAATAATGAGATGCATCCATATTGGTTTACTCTGTATTCAAGAAAACGTAGTTGAGAGACCAACCATGGCTTCTGTTGCACTCATGCTTAATAGTAATTCTCTCGCTCTCTCAATACCTTCGAAACCTGCGTATTTTATGGGAGGTGGAATTGGTAGACTACCAGACATGCAGCAACAAGTTGATAATGTAAGTGGAACAAGATCGGATGAATCGGTGAACCAAATTTCAATTACTGATATATACCCACGATAA 1980 0.3692 MAIVIVSCKLSFSFYYFLLLLIIIVSQAKAQQNFLDHFCMNEKGNYTANSTYQNNLNILLSDLSTNTQINYGFYNFSNGQKTNKVYAIGLCRGDVKPDICRSCLNDARVLLTRLCPNQKEAIGWYDNCMLRYSNRSIFGIMEGSPSFYILSFKNVTRADQFNRVLGNLLIKLKEKAASSNDSRVKYATGNETGLNFQTIYGLVQCTPDLSFQDCNSCLDAAISEIPSKVGAGLVTPSCKIEFETFLFYDPPLIVDTDETSQPQEKSKSSNTTTIAIVVPTVVVVLVLLTLIICICLRRNRHSMAGLNIEGEEEMTIAESLQFNFDIIRVATNDFSDSNKLGQGGFGIVYQGKLPNGQVIAVKRLSTNSNQGDTEFKNEVLLVAKLQHRNLVRLLGFCLERRERLLVYEFVPNKSLDYFIFDLTRKTQLKWEKRYNIIKGIARGILYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGLARLFVIGQTEGSTNRIVGTYGYMAPEYAMHGEFSVKSDVFSFGVLVLEIISGHKNSANICHGEDVEYLLTYAWRSWREGQAINIIDPSLSNFSVNEIMRCIHIGLLCIQENVVERPTMASVALMLNSNSLALSIPSKPAYFMGGGIGRLPDMQQQVDNVSGTRSDESVNQISITDIYPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0524 659 SUPERFAMILY Protein kinase-like (PK-like) 318 605 IPR011009 -
Tpr1g0524 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 637 - -
Tpr1g0524 659 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Tpr1g0524 659 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Tpr1g0524 659 CDD STKc_IRAK 340 606 - -
Tpr1g0524 659 Pfam Protein kinase domain 335 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0524 659 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Tpr1g0524 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 637 - -
Tpr1g0524 659 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Tpr1g0524 659 ProSiteProfiles Gnk2-homologous domain profile. 143 247 IPR002902 -
Tpr1g0524 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Tpr1g0524 659 SMART serkin_6 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0524 659 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Tpr1g0524 659 Gene3D - 146 247 IPR038408 -
Tpr1g0524 659 Gene3D - 31 136 IPR038408 -
Tpr1g0524 659 ProSiteProfiles Protein kinase domain profile. 334 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0524 659 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0524 Tpr-Chr1 4415841 4422809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0524 15 659 Receptor kinase-like Gene Family AT4G21410 49.192 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0524 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0524 - - mtr:MTR_5g065130 789.26