Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0523 ATGCTCCATTATCATTCAAAGGCAATATCAGAAAGAATGGCAACAGTGTCTTGCAAGTTATCATTTTCCTTTTACTCTTTTCTCCTTCTTCTCATTATTATTGTATCTCAAACTAACGGCCAGCCAGATTTTTTGTACAACTTTTGTATAAACGATAAAGGCAACTACACAGCCAATAGCACATATCAAAATAACCTTAATATCCTTTTGTCCAATCTCTCTTCAAACACACAAATCAACTACGGTTTCTACAATTTCTCTTACGGCCAAAACAACGATAAAGTAAACGCCATTGGACTCTGCAGGGGAGATGTTAAGCCTGATGTTTGCCGCAATTGTCTCAACGATTCAAGAGTTCTTCTAACACGGCTTTGTCCAAATCAAAAAGAAGCAATTGGTTGGTATGAAGACTGCATGTTGCGCTACTCCAACCGATCAATATTTGACATTATGGAAGTTTCACCTGCATTCTATTTGCCAAACAATAACAATGCAACAGATGCGGATCAATTTACTCAAGTTCTTGGGAACTTGATGAAGAAACTGAAAGATAAAGTTGCATCAAGTGACAACTCTCGTTTTAAGTATGCTACGGATAATGAAACTGGTGTGAACTTAAATTTTCAAACCATATATGGTCTTGTGCAGTGTACACCTGATTTATCATTACAAGAGTGTAATCGTTGTTTAGATGTTGCTATCTCAGAAATTCCAAGTTGTTGTAATAACAAGGTTGGTGCTAGACTTGTTACACCAAGTTGTAAGATTAGATTTGAAACCTATCTCTTCTACGATCCTCCGCTTATAGTAGACGACCCAGATGGAACCTCTCCACCACAAGAAAAAAGCAAATCATCTCATACTACTACCATTGCCATAGTTGTGCCTACTGTCGTTGTAGTTCTTGTTCTTCTAACTTTGATCATTTGCATATGCTTAAGGAGAAATCGCCACAGTATGGCAGGGGTAAATCTCGAAGGAATACAAGATGATGATGATGATGATAATGATAACGATGATGATATTGAAATCGCTGAGTCATTACAATTCAACTTTGACACAATAGGAGTTGCTACAAATAACTTTTCCGAAGCTAATAAACTCGGACATGGCGGATTTGGAGTTGTTTATCAGGGAAAACTCTCGAGTGGACAAGTGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTATTGGCTAAGCTTCAACATCGAAATTTAGTCAGACTACTTGGTTTTTGTCTAGAAAGAAAAGAAAGGCTACTTGTTTATGAATTTGTTCATAATAAAAGTCTCGATTACTTTATATTTGATCCAATAAAGAAAGCACAATTAGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGCCTTCTTTACCTTCACGAGGATTCTCGACTTCGTATTATACATCGTGATCTTAAAGCAAGTAACATTCTCTTGGACGAAAATATGAATGCTAAAATATCAGATTTTGGGATGGCCAGACTATTGCTTGTTGATCAAACACAAGTAAATACAAACAAAATCGTTGGAACATATGGATATATGGCTCCTGAGTATGCAATGTTTGGACAATTTACAGTAAAATCAGATGTTTTTAGCTTTGGCGTACTAGTTCTAGAGATTATAAGTGGCCAAAAAATTAGTCGCTTTCTTGATGGACAGAGTCAGGAGGATTTACTCAGCTTCGCATGGAGAAACTGGAGGGAGGGTACAATCACAAATATAATAGACCCATCATTAAAAAATGGTTCACAAAATGAAATAATGAGATGCATTCACATTGGACTACTTTGTGTTCAAGAAAATTTGGTTGACAGACCAACTATGGCAACCATTGCACTCATGCTTAGTAGTTATTCTCTCACAATGCCTCTACCTGTGGAGCCCGCATATTCTATGGACGGGAGAACTAGAAGCCTTTCATACACGGAATCATCTGGGGAAGATAAAGTAACAACAGGTTCACTTGAATCCATAAGTATATCAGTAAATGAGAATACAATGTCTTAA 2058 0.3688 MLHYHSKAISERMATVSCKLSFSFYSFLLLLIIIVSQTNGQPDFLYNFCINDKGNYTANSTYQNNLNILLSNLSSNTQINYGFYNFSYGQNNDKVNAIGLCRGDVKPDVCRNCLNDSRVLLTRLCPNQKEAIGWYEDCMLRYSNRSIFDIMEVSPAFYLPNNNNATDADQFTQVLGNLMKKLKDKVASSDNSRFKYATDNETGVNLNFQTIYGLVQCTPDLSLQECNRCLDVAISEIPSCCNNKVGARLVTPSCKIRFETYLFYDPPLIVDDPDGTSPPQEKSKSSHTTTIAIVVPTVVVVLVLLTLIICICLRRNRHSMAGVNLEGIQDDDDDDNDNDDDIEIAESLQFNFDTIGVATNNFSEANKLGHGGFGVVYQGKLSSGQVIAVKRLSRDSGQGDIEFKNEVLLLAKLQHRNLVRLLGFCLERKERLLVYEFVHNKSLDYFIFDPIKKAQLDWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDENMNAKISDFGMARLLLVDQTQVNTNKIVGTYGYMAPEYAMFGQFTVKSDVFSFGVLVLEIISGQKISRFLDGQSQEDLLSFAWRNWREGTITNIIDPSLKNGSQNEIMRCIHIGLLCVQENLVDRPTMATIALMLSSYSLTMPLPVEPAYSMDGRTRSLSYTESSGEDKVTTGSLESISISVNENTMS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0523 685 ProSiteProfiles Gnk2-homologous domain profile. 153 263 IPR002902 -
Tpr1g0523 685 Gene3D - 155 263 IPR038408 -
Tpr1g0523 685 Gene3D - 42 146 IPR038408 -
Tpr1g0523 685 Pfam Salt stress response/antifungal 163 261 IPR002902 -
Tpr1g0523 685 Pfam Salt stress response/antifungal 49 144 IPR002902 -
Tpr1g0523 685 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 667 - -
Tpr1g0523 685 ProSiteProfiles Gnk2-homologous domain profile. 44 147 IPR002902 -
Tpr1g0523 685 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0523 685 CDD STKc_IRAK 368 632 - -
Tpr1g0523 685 Gene3D Transferase(Phosphotransferase) domain 1 438 639 - -
Tpr1g0523 685 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Tpr1g0523 685 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 667 - -
Tpr1g0523 685 SMART serkin_6 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0523 685 Pfam Protein tyrosine and serine/threonine kinase 365 629 IPR001245 GO:0004672|GO:0006468
Tpr1g0523 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Tpr1g0523 685 SUPERFAMILY Protein kinase-like (PK-like) 345 632 IPR011009 -
Tpr1g0523 685 Gene3D Phosphorylase Kinase; domain 1 328 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0523 Tpr-Chr1 4401622 4405423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0523 19 650 Receptor kinase-like Gene Family AT4G21410 50.459 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0523 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0523 - - gmx:100782800 801.971