Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0521 ATGGCTCTGTTTCTCTTTCTCTGTTTTTTGTTTTCTATAATTGTATCCCAAGCCAAAGCAGGTGATCCTGTATCCTGTGATAACAATAGAGGAAACTACACAACCGATAGCGCCTACGACAACAACCTTAAAACCGTTTTATCCAGTTTCTCTTCCCATAAACAAATTAACTATGGTTTCTACAATTTCTCATATGGTCAAGACCCCAACAAAGCATACGCCATTGGATTGTGTCGCGGAGATCTTAACACAACTCAGTGCCTTACAAACATAAACAATTCCTTTGTTTATCTCAGACAACAGTGTCCAAATCAAAAAGAAGCAATTGTCTGGGGTGGTGACTTCACTTTATGGTATTCAAATCGCTCGATTTTTGGGATCGTTGAAACTAGTCCTACACAATATTTGATTTATGAAAGGAATGCAAGTGATGCAGAACGGTATAAAGAAGCATTGAGTAACTTGATGACAAATTTAACAGAAAAAGCTGCATCAGGTGATTCTCGTCGTAAATATGATGCTGATAGTGTTAGTGATCCTGCAAATTTTGCAACCATATATGGGTATGCTCTTTGTATGCCGGATTTGTCATCGCAACAATGCAATGATTGTTTGGCTCAGACAGTTTTGGAAATTCCAGAATGTTGTAATGGGAAGATGGGAGGAAATATCCTTAAACCAAGTTGTCGTATTAGATTTGATCCTTATCGCTTCTTCAATCCGACGATTGTGTTAGATTCAAATGCAACTCCTCCTAAACCATCGTCACTACCACCTTCTCCATCCACCACCAATAGCACTTCTACAGGACACAACAAAATCCGAACTGTCATCGCCACTGCAGTGCCAGTTGCTACTGTGTTTTTGTTCCTCATTTTTATATGCATCTATTTAAGATTCAGAAAGCTAAAACAAATGGTTGAAGCTGGTAATGGAGAATATGATGATGGAGATGGAGATGAAGATGAAGATGAAATTTCAATTGTTGAGTCATTTCAATTTAACTTTGATACCATTCGAGTTGCTACAAGTGACTTCTCCGACTCTAATAAACTTGGGCAAGGTGGATTTGGAGTTGTTTATCGGGGTAAACTACCTAATGGACAAATGATTGCTGTCAAAAGATTGTTAAAAGATTCCAGCCAAGGAGATGTGGAATTTAAAAATGAAGTACTATTAGTAGCCAAGCTTCAACATCGAAATTTAGTTAGACTACTTGGTTTCAGTTTAGAAGGGACTGAAAGGCTGCTTATTTATGAGTTTGTTACAAATAAAAGTCTTGATTACTTCATCTTTGATCCAATCAGGAAAGCACAATTGAATTGGCAAAAGCGCTACGATATTATAAGAGGTATTGCCCGAGGTCTTCTTTATCTTCATGAGGATTCTCGCTTACGAATTATACACCGTGATATCAAAGCAAGCAATATTCTCTTAGACAATGAGATGAATCCTAAGATAGCCGATTTTGGATTGGCAAGATTGTTTGTTATAGATCAAACTCAAGGAAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGCAATGCATGGACAATTTTCGGTAAAATCAGATGTCTTTAGTTTTGGAGTATTGATTCTTGAGATTATAACTGGCCATAAAAATAGCACAAATATTGGTCATGGAAATGATGCAGAGTATCTATTGAGCTATGTGTGGAAAAGCTGGAGAGAACGGAAAGCTATAAATACTATAGATCCATCATTAAACAATGTTTCAGCAAATGAAATAATGAGATGCATCCATATTGGTTTACTTTGTATTCAAGAAAACGTAGTTGAGAGACCAACCATGGCTTCTGTTGCACTCATGCTTAATAGTAATTCTCTCACTCTCTCAATACCTTCAAAACCTGCATATTTTTATGGAAGTGGAACTAGAAGCCTACAAGACATGCAGTTATGGGCTGGACATATAGATTCAACAACTTCAAGTGAATCAAAGAACACGGCTTCAAATACCGATCCATACCCTCGCTAG 2016 0.3715 MALFLFLCFLFSIIVSQAKAGDPVSCDNNRGNYTTDSAYDNNLKTVLSSFSSHKQINYGFYNFSYGQDPNKAYAIGLCRGDLNTTQCLTNINNSFVYLRQQCPNQKEAIVWGGDFTLWYSNRSIFGIVETSPTQYLIYERNASDAERYKEALSNLMTNLTEKAASGDSRRKYDADSVSDPANFATIYGYALCMPDLSSQQCNDCLAQTVLEIPECCNGKMGGNILKPSCRIRFDPYRFFNPTIVLDSNATPPKPSSLPPSPSTTNSTSTGHNKIRTVIATAVPVATVFLFLIFICIYLRFRKLKQMVEAGNGEYDDGDGDEDEDEISIVESFQFNFDTIRVATSDFSDSNKLGQGGFGVVYRGKLPNGQMIAVKRLLKDSSQGDVEFKNEVLLVAKLQHRNLVRLLGFSLEGTERLLIYEFVTNKSLDYFIFDPIRKAQLNWQKRYDIIRGIARGLLYLHEDSRLRIIHRDIKASNILLDNEMNPKIADFGLARLFVIDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIITGHKNSTNIGHGNDAEYLLSYVWKSWRERKAINTIDPSLNNVSANEIMRCIHIGLLCIQENVVERPTMASVALMLNSNSLTLSIPSKPAYFYGSGTRSLQDMQLWAGHIDSTTSSESKNTASNTDPYPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0521 671 CDD STKc_IRAK 352 618 - -
Tpr1g0521 671 MobiDBLite consensus disorder prediction 249 269 - -
Tpr1g0521 671 ProSiteProfiles Protein kinase domain profile. 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0521 671 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Tpr1g0521 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 660 - -
Tpr1g0521 671 Pfam Protein kinase domain 347 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0521 671 Gene3D - 23 123 IPR038408 -
Tpr1g0521 671 Gene3D - 131 238 IPR038408 -
Tpr1g0521 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Tpr1g0521 671 Gene3D Phosphorylase Kinase; domain 1 318 421 - -
Tpr1g0521 671 SUPERFAMILY Protein kinase-like (PK-like) 331 635 IPR011009 -
Tpr1g0521 671 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Tpr1g0521 671 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Tpr1g0521 671 Pfam Salt stress response/antifungal 141 234 IPR002902 -
Tpr1g0521 671 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Tpr1g0521 671 ProSiteProfiles Gnk2-homologous domain profile. 130 238 IPR002902 -
Tpr1g0521 671 Coils Coil 142 162 - -
Tpr1g0521 671 SMART serkin_6 346 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0521 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0521 Tpr-Chr1 4389693 4400366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0521 3 632 Receptor kinase-like Gene Family AT4G21410 49.375 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0521 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0521 - - mtr:MTR_5g065130 878.241