Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0501 ATGATGGGTGAAGAGAGGGTAGCGAGGCGACAGATTGGTAGGAAAGGAAGCATGGCACGAACATGGCTGATGATGAGCAGTGAGGGGCAGAGACAGATGGTGGAGGCAGGGAGACAGTCGATAATGCGGCGGACAGGACTAACAGCTAGGGACCTTAGGAATCTTGATCCAATGTTGTCTTACCCTTCAACAATTGTGGGACGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAGGCTATCATTACTGCTCATGAGGTTCTTTTGCTCAATTCTAGAGATCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCAAGGATTCTTAATCATCACTGTACTGCTCCTACTACTGATCATCCTCAGGAGGGTCAAAATGGGAAGGATCGAAGTGAAATAAAGAGAGATAGCAGTAACAATGTGAAGATTCTTCCATTTGAATTTGTTGTATTGGAGTCATGCCTCGAAGCTGTTATTAGTTCCTTAGAAAATGAGGCAAATATATTGGAATTGGAGGCTTTCCCAGCCTTAGATAAGCTAACATCAAAGATTAGTACTCTTAATTTAGAACGAGTTCGCCATATTAAGAGTCGATTGGTTGCCTTAACTTCTCGTGTTCAAAGGGTAAGGGATCAACTAGAAAACTTGTTGGATGATGATGGAGATATGGCTGAGCTATATCTGACAGACAAGTTGGCTCAACAGCAGTTTGAAATTTTTTCTGCTGCTTCATCCATCAATAATAATGGGGATGACATGACGGCGAATCAAGTTCTTCAACAAGATATAGTTGACAGGACTCATCCTGAAATATCATTGGAACCAGTAGAAGATTTAATTGATGGTGAAGATTATGAAAATGTTGGTGGTGAAATCTCTGGAACCCAAGCTGCTACTGTCTATAGTGGTGTACCAAATGTTCAGGAACTTGAGATGCTTTTAGGAGCATACTTTGTCCAAATTGGAGCCACATTGAACAAATTATCTGCGCTAGCTGAATATGTCGAGGACACGGAGGACTACATAAACATTACATTGGATGACAAACAGAACCGTATTCTACAAGCAGGAGTTCAGATAGGCACAGCAAGTGTGATTGTGAATTTCTTTGTTGTTGTGACAGGTATTTTTGGAATGAATATTCACATTGACCTATTTGAAGCTAAAGCGAATTCAGCATTCTTGGAGACAGTTTTTGGATGCACTGCTACTTGCATAATCTTATACTTCCTTGCCATGTTTTGGTACAAGAAAAGGCGCATACTGTAA 1272 0.4064 MMGEERVARRQIGRKGSMARTWLMMSSEGQRQMVEAGRQSIMRRTGLTARDLRNLDPMLSYPSTIVGRDKAMVLNLEQIKAIITAHEVLLLNSRDPSVIPFVDELHARILNHHCTAPTTDHPQEGQNGKDRSEIKRDSSNNVKILPFEFVVLESCLEAVISSLENEANILELEAFPALDKLTSKISTLNLERVRHIKSRLVALTSRVQRVRDQLENLLDDDGDMAELYLTDKLAQQQFEIFSAASSINNNGDDMTANQVLQQDIVDRTHPEISLEPVEDLIDGEDYENVGGEISGTQAATVYSGVPNVQELEMLLGAYFVQIGATLNKLSALAEYVEDTEDYINITLDDKQNRILQAGVQIGTASVIVNFFVVVTGIFGMNIHIDLFEAKANSAFLETVFGCTATCIILYFLAMFWYKKRRIL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0501 423 CDD Mrs2_Mfm1p-like 22 422 IPR039204 -
Tpr1g0501 423 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 422 IPR039204 -
Tpr1g0501 423 PANTHER MAGNESIUM TRANSPORTER MRS2-3 14 422 - -
Tpr1g0501 423 Coils Coil 200 220 - -
Tpr1g0501 423 MobiDBLite consensus disorder prediction 115 135 - -
Tpr1g0501 423 Gene3D - 5 93 - -
Tpr1g0501 423 Coils Coil 153 173 - -
Tpr1g0501 423 Gene3D Magnesium transport protein CorA, transmembrane region 100 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0501 Tpr-Chr1 4212982 4215578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0501 21 423 MRS2 Gene Family AT3G19640 53.167 5.96e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0501 - - aprc:113872466 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0501 1 4212982 4215578 Tpr1g0501 1 4212982 4215578 ECH