Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0449 ATGGAAACCAAAGTTGATGAACTTCAAGTAATGGACCATTTGACCACACCAACAACAACAACTGGGACCAGTTTCTCTCAGTTACTATTAGAAGATGATAATGAATTGGGTCTTGCTGGTGTGGACCAAACCTTTTCAGCTTCTCTTTTCTCTCTTCATAACCCACCTAAAATGCTTTGTTTTGGAAACTATCAAAATGATATGGAAATTGAAACCAACGTCATAATAACTCCTCAGAAATCTGTCATCACTTCAAGTGATTCTTCTTCAACTTCTTCATGCAATCATGCCAACACTGGTTTCAATTCCTTAACAACAACCACTAAACCCAATAAAAAGCGGAATGGGTCAGGAGGAGGAGGAGGACAAGAACTTGGGACCAAAGCAGGTGTTGGAGGGCAGAGATGTCCTAAGAAGAGCAAAGCAGAGAACAACCCCACCTCAACTGGACATACAAAGAAAAAGGAGAAGCTTGGGGAAAGAATTGCAGCATTACAACAACTTGTTTCTCCCTTTGGCAAGACTGATACAGCTTCAGTGCTTCACGAGGCTACTGGTTACATAAGATTCTTACATGATCAAGTTCAGGTTCTGTGCTCTCCATACCTGCAACCTTCACAAATTCAATTTCAAAATCACCATGGGGACGGAGATAACAATGGAGAAGAAGTGGAAAAAGATTTGAAGAGCAGAGGTTTGTGTTTGATCCCTGTTGGATGCACCCTACACGTGGCAAGTACTAATGGTGCTGATTATTGGTCACCTGCTACAATAGTGAACAATGTTTCACCTTCAACTATTGCTAAGCAGTAA 813 0.4121 METKVDELQVMDHLTTPTTTTGTSFSQLLLEDDNELGLAGVDQTFSASLFSLHNPPKMLCFGNYQNDMEIETNVIITPQKSVITSSDSSSTSSCNHANTGFNSLTTTTKPNKKRNGSGGGGGQELGTKAGVGGQRCPKKSKAENNPTSTGHTKKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQPSQIQFQNHHGDGDNNGEEVEKDLKSRGLCLIPVGCTLHVASTNGADYWSPATIVNNVSPSTIAKQ* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0449 270 CDD bHLH_AtbHLH_like 153 198 IPR045239 -
Tpr1g0449 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Tpr1g0449 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 208 IPR036638 GO:0046983
Tpr1g0449 270 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 52 248 - -
Tpr1g0449 270 Gene3D - 151 210 IPR036638 GO:0046983
Tpr1g0449 270 MobiDBLite consensus disorder prediction 87 157 - -
Tpr1g0449 270 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 248 - -
Tpr1g0449 270 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0449 Tpr-Chr1 3795730 3798751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0449 125 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 46.617 7.05e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0449 - - mtr:MTR_1g107185 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0449 1 3795730 3798751 Tpr1g0449 1 3795730 3798751 ECH