Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0433 ATGATTAAGAATCATGCTGATTCAAACAAACCAATTTCATGTATCATAAACAACCCTTTCCTTCCATGGATAATTGTAAGTCAAATAGAGCCACTTACGGAGCAACAAATACTTGGAATATGTGGGTTGCAACAATCAACACAAGAAGCAGAAGAAGCACTTTCACAAGGGCTTGATGCACTTAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTAAGCTGTCCTCCTAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATCAACAAGCTCTCTACTCTTGAAACTTTTGTCAGACAGGCAGATAATCTGAGGCATCAAACAATTCATCGTCTGCATCAGCTGTTAACAACTCGTCAAGCTGCAAGGTGTTTCGTTGCAATGTCTGAGTATTTCCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGCCCTCGCCAAGAATAG 459 0.4118 MIKNHADSNKPISCIINNPFLPWIIVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSCPPNMANYMGQMALAINKLSTLETFVRQADNLRHQTIHRLHQLLTTRQAARCFVAMSEYFHRLRALSSLWLTRPRQE* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0433 152 ProSiteProfiles DOG1 domain profile. 1 148 IPR025422 GO:0006351|GO:0043565
Tpr1g0433 152 PANTHER TRANSCRIPTION FACTOR TGA9 24 151 - -
Tpr1g0433 152 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 24 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0433 Tpr-Chr1 3688554 3694633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0433 24 152 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 73.134 7.01e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0433 K14431 - gmx:100776311 237.654