Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0427 ATGGGTAGTCTTGAAGTTGCTGAAAGAACAACAGTTGGATTGGCTGCAAAAGATCCTTCTGGAATTCTCACTCCGTACAAATACACCCTTAGAAACACAGGACCGGATGATGTTTACATCAAAATTCATTACTGTGGTATTTGTCATTCTGATCTTCATCAAATCAAAAATGATCTTGGCATGTCCAATTATCCCATGGTGCCTGGGCATGAAGTGGTTGGTGAGGTACTAGAGGTGGGATCAAATGTTAGCAAGTTCAGTGTGGGAGAAATTGTGGGAGTTGGACTTCTGGTTGGTTGCTGCAAAAGTTGTAGGGCTTGTGATTCTGATATTGAGCAATACTGTAACAAGAAGATCTGGTCTTACAATGATGTTTATGCCGATGGAAAAGTCACTCAGGGTGGATTTGCTGAAACTACTGTCGTTGAACAGAAGTTTGTTGTGAAAATACCAGAGGGATTGGAACCAGTGCAAGTTGCACCATTGTTATGTGCAGGTGTGACAGTATACAGTCCACTTGCACATTTTGGGCTGAAACAAAGTGGGCTTAGAGGTGGAATTTTGGGCCTTGGTGGTGTAGGACACATGGGGGTGAAAGTAGCAAAGGCATTTGGTCACCATGTCACTGTGATAAGTTCTTCTGATAAGAAGAAGAAAGAAGCACTTGAGGATCTTGGAGCTGACAATTATCTTGTTAGCTCAGATACTGTTGGGATGCAAGAAGCTGCTGATTCACTTGATTATATCATTGATACTGTTCCTGTTGGTCACCCTCTTGAGCCTTATCTTGCATTACTCAAAACTGATGGAAAATTGATCTTGATGGGTGTTATTAACACCCCTCTTCAATTTGTTACCCCTATGGTCATGCTTGGGAGGAAAACAATTACTGGAAGCTTTGTTGGGAGTGTGAAGGAGACGGAAGAGATGTTGGAGTTTTGGAAAGAGAAGGGTCTAACCTCGATGATTGAAATAGTGACTATGGATTACATTAACAAAGCTTTTGAAAGATTGGAGAAGAATGATGTGAGGTATAGGTTCGTTGTGGATGTCAAAGGAAGTAAAATTGAGGAGTGA 1077 0.415 MGSLEVAERTTVGLAAKDPSGILTPYKYTLRNTGPDDVYIKIHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVSKFSVGEIVGVGLLVGCCKSCRACDSDIEQYCNKKIWSYNDVYADGKVTQGGFAETTVVEQKFVVKIPEGLEPVQVAPLLCAGVTVYSPLAHFGLKQSGLRGGILGLGGVGHMGVKVAKAFGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLALLKTDGKLILMGVINTPLQFVTPMVMLGRKTITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSKIEE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0427 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 356 - -
Tpr1g0427 358 Pfam Alcohol dehydrogenase GroES-like domain 35 150 IPR013154 -
Tpr1g0427 358 PANTHER ALDEHYDE REDUCTASE 5 356 - -
Tpr1g0427 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 319 IPR036291 -
Tpr1g0427 358 SMART PKS_ER_names_mod 21 349 IPR020843 GO:0016491
Tpr1g0427 358 CDD CAD1 12 350 - -
Tpr1g0427 358 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Tpr1g0427 358 Gene3D - 15 351 - -
Tpr1g0427 358 SUPERFAMILY GroES-like 18 182 IPR011032 -
Tpr1g0427 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Tpr1g0427 358 Gene3D - 165 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0427 Tpr-Chr1 3631412 3634105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0427 1 358 Monolignol Biosynthesis Gene Families AT3G19450 76.536 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0427 K00083 - gmx:100777558 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0427 1 3631412 3634105 Tpr1g0427 1 3631412 3634105 ECH