Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0421 ATGATGAACCTTAACACCCTCTTGAAAGTTTCATCTTTTTTTCTTCTAGTGCAACTTCAATATTCAGTTGCTCTTAACTCTGATGGAATTTTCTTGCTTAATTTCAGATACTCAATCCTTAGTGACCCTTTATCAGTCTTTGATAACTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTGCATGCAGTGAATTAGGAACTCCTAATACACCTGATTCCTTTAGAGTAACTAGCTTAATCCTTCCAAATAGTCAACTTCTTGGTTCCATTACAGAAGATTTAGGCTTAATCCAAAACCTTAATCACATTGATCTCTCAAACAATTTCCTCAATGGTTCATTACCAAACACTATCTTCAACTCTTCTCAACTACAATATCTTTCACTCTCCAACAATGTCATCTCAGGTAAACTACCTGAGCTGATTGGTTTATCAACAAACCTTCAAATTCTCAACCTTTCTGATAATGCCTTTGTTGGTTCCATACCAAAAAACCTCACTTCTCTACAGAATCTAACAGTTGTTTCTTTAAAAAGTAACTATTTTTCTGGTCAAATTCCAAATGGGTTCAACTCAGTTGAGATTCTAGATCTGTCCTCCAATTTACTCAATGAATCTCTTCCAAATAACTTCCAAGGCCAAAATCTTCAATACTTCAATCTCTCTTATAACAAACTCTCTGGAGCAATTCCACAAACATTTGCTAAGCACATTTCTGCAAACTCAACAATTGATCTCTCTTTCAACAATCTAACAGGTCCAATACCTGAATCTATGGCTTTACTCAATCAAAAAACAGAATCATTCTCTGGAAATTCTGATCTATGTGGTAAACCACTGAAAAATCTTTGTACTATTCCCTCTAGTATCTCAACCCCACCAGAAAATATCACAAACACATCTTCACCAGCCATTGCAGCTATACCAAGAACAATAGATTCATCACCAGGAACAAACACAACATCAACATCAACAACTAGTGATTCTTCTCAGAATGGTCTTAAACCTGCTACAATAGCAGCCATTGTTGTAGGTGATATACTTGGCATGGCAATTTTGGCTCTTATCATTCTTTTTGTATATCAACAAAGAAAGAAAAGATATCCAAAATCAAACACTGCACTTCAAGAAACAAAAGTGTTAGAATCTGTAGCAAAACAAGATCAAGAATCTTTAAAACCACACTCACTTCCATGTTCTTCATGTTGTTTAACAATTAAACAAGAAGAGACATCAGAAGAAGATCCAAGTTCGGACGAAAGCGACCGCGACATTAATACTATTACGGTCAATAACCCGAAAGAAGGCACGCTTGTGACGGTGGATGGCGAGACGAAGATGGATTTGGAGACATTGTTGAAGGCATCAGCTTATATACTTGGAACAAGGAAAGTGAGTATTGTGTATAAAGCAGTTTTACAAGATGGAAGAGTTTTTGCTGTTAGAAGAATTGGTGAGTGTGGTGTTGAAAGAATGAAGGAATTTGAGAATCATGTTAGAGGTATTGCAAAGATTAAGCATCCTAATTTGGTTAAGATTCGTGGTTTCTGTTGGGGTGAAGATGAGAAGCTTGTTATTTCTGATTATGTTCCTAATGGCAGTCTCTCAACTATTGGTTACAGAAAAGGAGGTACGTCCCCAATGAACTTGCCCTTGGAGGTGCGGTTGAAGATAGCAAAAGGGGTAGCAAGAGGACTAGCATTCATTCATGAGAAGAAACATGTGCATGGCAATGTTAAACCAAGCAACATTTTATTAAATTCAGAAATGGAACCCATCATAAGTGATTTTGGACTTGACTTACTTCTCAAGAATGATATCAACCATAGAGGAAACGGTTCAGCTAGACAATTAGTGAACCAAAGAACCCAACAACAAAACCAAGAGCTTCTCATTGGTTCAACAACTCCTACAATGGGGTCATCATCATCTACTAGTGGTGGTGTTGGTCAAGTGCAATATCAAGCACCAGAATCTTTTCAAAACATAAAACCAAACCACAAATGGGATGTTTATTCATTTGGTGTTGTTTTGTTGGAGCTTTTAAGTGGAAGGGTTTTCTCAGACCGGGAGTTAGACCAGTGGTCCATTTCCGGTTCGGTTGAAGAGGAGAAAACCCGGGTTTTGAAAATGGTTGATGTGGCAATTAAGCATGAGATTGAAGGTAGAGAAAATGCGGTGTTCAGTTGTTTTAAGTTGGGTTTGAATTGTGTTTCTCTTGTCCCACAAAAGAGACCGTCTATGAAGGAAGCACTTCAAATTTTGGAGAAGATCCCTACCGTTGGTATTAATTAA 2304 0.3746 MMNLNTLLKVSSFFLLVQLQYSVALNSDGIFLLNFRYSILSDPLSVFDNWNYDDATPCSWHGVACSELGTPNTPDSFRVTSLILPNSQLLGSITEDLGLIQNLNHIDLSNNFLNGSLPNTIFNSSQLQYLSLSNNVISGKLPELIGLSTNLQILNLSDNAFVGSIPKNLTSLQNLTVVSLKSNYFSGQIPNGFNSVEILDLSSNLLNESLPNNFQGQNLQYFNLSYNKLSGAIPQTFAKHISANSTIDLSFNNLTGPIPESMALLNQKTESFSGNSDLCGKPLKNLCTIPSSISTPPENITNTSSPAIAAIPRTIDSSPGTNTTSTSTTSDSSQNGLKPATIAAIVVGDILGMAILALIILFVYQQRKKRYPKSNTALQETKVLESVAKQDQESLKPHSLPCSSCCLTIKQEETSEEDPSSDESDRDINTITVNNPKEGTLVTVDGETKMDLETLLKASAYILGTRKVSIVYKAVLQDGRVFAVRRIGECGVERMKEFENHVRGIAKIKHPNLVKIRGFCWGEDEKLVISDYVPNGSLSTIGYRKGGTSPMNLPLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDFGLDLLLKNDINHRGNGSARQLVNQRTQQQNQELLIGSTTPTMGSSSSTSGGVGQVQYQAPESFQNIKPNHKWDVYSFGVVLLELLSGRVFSDRELDQWSISGSVEEEKTRVLKMVDVAIKHEIEGRENAVFSCFKLGLNCVSLVPQKRPSMKEALQILEKIPTVGIN* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0421 767 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 21 763 - -
Tpr1g0421 767 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Tpr1g0421 767 ProSiteProfiles Protein kinase domain profile. 457 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0421 767 MobiDBLite consensus disorder prediction 312 335 - -
Tpr1g0421 767 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Tpr1g0421 767 PANTHER OS04G0122200 PROTEIN 21 763 - -
Tpr1g0421 767 Gene3D Phosphorylase Kinase; domain 1 428 532 - -
Tpr1g0421 767 Gene3D Transferase(Phosphotransferase) domain 1 533 764 - -
Tpr1g0421 767 CDD TM_EGFR-like 341 370 - -
Tpr1g0421 767 SUPERFAMILY L domain-like 28 284 - -
Tpr1g0421 767 SUPERFAMILY Protein kinase-like (PK-like) 463 761 IPR011009 -
Tpr1g0421 767 Pfam Protein kinase domain 463 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0421 767 Gene3D Ribonuclease Inhibitor 25 194 IPR032675 -
Tpr1g0421 767 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0421 Tpr-Chr1 3588984 3592852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0421 24 761 Receptor kinase-like Gene Family AT2G15300 50.456 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr1g0421 Pkinase 4.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0421 - - gmx:100820334 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0421 1 3588984 3592852 Tpr1g0421 1 3588984 3592852 ECH