Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0328 ATGGCCTTACAATTCAAAATGACCCCCCTTTTCATTTTCAAATCATTAATATTCTTCCAGTTTCTGCTTGTTTCAGGTCAAGATGGAATATGTCCAACCTCTTTTAGTTGTGGATATCTTGGCAATATTACCTTTCCTTTCACGATTAAACAACACCCTCACTGTGGCTTATTGACCATAAGTGGTTGTGATAACAAAAATATATCTGCTCCCAAAACCATCCAACTAGGCAAGACGCCATCAAAACAGTTTATTAGTGTTATATCCGTGGATGGTGATATCATTTCGGTCTCAGATGAAGCTCAACGAAAGAATTTGTTATCCAAAAAATGCCAAGCCTTTCGCAATTATACTCTTCCTCCCAAATCTCTTTTAGGTTCTTTCTATATCAAATATAATATAACTATGTTCAAATGCAACCACTCCCTTAGTGTCACCCCTCCCAAATTATTTGTCAAATATACAAACACAAACTGTTCCGGTTATAATATCTACTATGACCCTCAAAATGCTGATATACCTCCTGGTTTCAAAGTACCAAGCTCTTTGGCAAAGTGTACAATGTTTCAGGTTGCAATAAGAGACATCCCTACTTCTCACCCCTTTGATTTCCTATCTTCTGATATCGCAATTGAAGTACAATTATCTGATGATTGTAATAAATGTTTTCGTCATCGAGGAGGCCGATGTCAACTTGACATTCACGGAAAGTTCCTTTGTGCCCAAGAGGATAAAAGATTGGCTCGGAAGTTAGGGCTTGGCATTGGACTCCTTGTTGTCATTATTATAACTGGGTTGCTGATTATATGGCGCTGCAAGCGACGCGTTCCTGAGTTCTACTCAAAGAAATACACAGAGAGTGACAGTGTCTACCATGGGGTACCAGTCTTTTCCTTTAAGGATCTTGAAGTAGCAACAAAAAAATTTGACAGTTCAAGAGAACTTGGAGAAGGAGGATTTGGAACTGTTTATTATGGAAAACTTAAAGATGGACGTGAAGTTGCTGTGAAGCGCCTATATCAGCACAACTTTAAACGAGTTGAACAGTTCATGAATGAAATCAAGATCCTCACTCGGTTGCGGCACAGAAATCTAGTGTCTCTCTATGGCTGCACTTCACATCAAAGTCATGAGCTATTGCTTGTTTATGAATACATTTCAAATGGAACTGTTGCCAGTCATCTGCGTCGTGAGTCTGGTTTTTTGCCGTGGCATATCCGAATGAAAGTTGCCTTAGAGACTGCTACTGCTTTGGCTTATCTCCATGCTTCTGAAATCATTCACCGTGATGTGAAAACAAACAATATTCTTCTTGACAACACCTTTTGCATTAAAGTTGCTGATTTTGGACTGTCAAAACTGTTCCCAAATGATGTCACACACGTCTCCACAGCTCCACAAGGAACCCCGGGCTATATGGATCCGGAATATCATCAATGCTACAGGCTTACAAGCAAGAGCGATGTTTACAGCTTCGGGGTTGTGCTTGTTGAGCTGATATCATCTATGCCAGCAGTTGATATGACCAGAGATAAGGATGAGATAAACTTGGCAAATTTAGCAGTAAGGAAAATTCAAAAAAGTGCAATCCATGAGCTGGTGGATCCTTCCCTTGGTTTTGAGTCAGATAATGATGTTAAAAAGAAAATAGTTTCAATAGCAGAATTGGCATTTCAGTGTTTGCAACGGGATAAGGAATTGAGGCCTTCAATGGATGAGGTTTTGGAGGTGATAAGGAGAATTGATAGTGGGAGTGGTAGGGATGAGTTTGGACATGTAGAGGAAGTAATAGACAGTGGAGCAAGGATATCATGTATCGATGTGCGTTCACTGTCACCGTCTTCACCCGACCATATTGAGGTGAAATTGTTGAAGAATAAAAAGTTAACACCTTCTCCTAAGTCTGTGTCAGAAAAATGGGATAGTGAATCCACTACTTCAAATGCCAGTGGTCAATCGGCAAGCCGAATGTAA 1974 0.3997 MALQFKMTPLFIFKSLIFFQFLLVSGQDGICPTSFSCGYLGNITFPFTIKQHPHCGLLTISGCDNKNISAPKTIQLGKTPSKQFISVISVDGDIISVSDEAQRKNLLSKKCQAFRNYTLPPKSLLGSFYIKYNITMFKCNHSLSVTPPKLFVKYTNTNCSGYNIYYDPQNADIPPGFKVPSSLAKCTMFQVAIRDIPTSHPFDFLSSDIAIEVQLSDDCNKCFRHRGGRCQLDIHGKFLCAQEDKRLARKLGLGIGLLVVIIITGLLIIWRCKRRVPEFYSKKYTESDSVYHGVPVFSFKDLEVATKKFDSSRELGEGGFGTVYYGKLKDGREVAVKRLYQHNFKRVEQFMNEIKILTRLRHRNLVSLYGCTSHQSHELLLVYEYISNGTVASHLRRESGFLPWHIRMKVALETATALAYLHASEIIHRDVKTNNILLDNTFCIKVADFGLSKLFPNDVTHVSTAPQGTPGYMDPEYHQCYRLTSKSDVYSFGVVLVELISSMPAVDMTRDKDEINLANLAVRKIQKSAIHELVDPSLGFESDNDVKKKIVSIAELAFQCLQRDKELRPSMDEVLEVIRRIDSGSGRDEFGHVEEVIDSGARISCIDVRSLSPSSPDHIEVKLLKNKKLTPSPKSVSEKWDSESTTSNASGQSASRM* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0328 657 Pfam Protein kinase domain 310 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0328 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Tpr1g0328 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 657 IPR044652 -
Tpr1g0328 657 Gene3D Phosphorylase Kinase; domain 1 280 385 - -
Tpr1g0328 657 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Tpr1g0328 657 MobiDBLite consensus disorder prediction 630 657 - -
Tpr1g0328 657 MobiDBLite consensus disorder prediction 622 657 - -
Tpr1g0328 657 SMART serkin_6 309 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0328 657 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Tpr1g0328 657 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 657 - -
Tpr1g0328 657 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0328 657 Gene3D Transferase(Phosphotransferase) domain 1 386 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0328 Tpr-Chr1 2823801 2827033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0328 35 651 Receptor kinase-like Gene Family AT1G25390 44.844 2.48e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr1g0328 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0328 - - aprc:113871893 785.793