Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0326 ATGGCCTCCGGTGAAGGGAGGCGATGTCATCATCATGATCTTGTGCCACTTGCTGCATTGCTTAAGAGAGAGATGAAGAGTGAGAGGATGGAGAAGCCTACTGTGAGAATTGGTCAAGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAGTTAAGACCGATTGTCAGCGTGTGCCCGGGAACTCTTCAACAGCCTTTTCTGTATTTGCGATCTTTGATGGACATAATGGAAATGCTGCTGCTGTTTTTACTAAGGAAAATTTGTTAAATCACGTGCTTTGTGCTCTTCCTCGAGGGCTTGGTCGAGATGAGTGGTTACAAGCTTTACCGAGGGCATTAGTTGCTGGATTCGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGGACCACAGCCACGTTTGTGATAGTTGATCGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCTCGTTGTATACTGGATACACAAGGTGGCGCTGTCACCACCTTAACAGTTGATCACAGACTAGAAGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAGGTTGGGAGGCTTAGCATTGTCGGTGGTGCTGAGATTGGCCCCCTTCGATGCTGGCCAGGAGGTCTATGCCTTTCTAGGTCAATTGGAGACATGGATGTTGGGGAATTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGGCTTATAATTGCCTCTGATGGCATATGGGATGCTGTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCTGCAATGCAGGTTGTTAAGGAAGCACTAAGAACTAGAGGGTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCACCAACACCTCCCCCCAAAAAGCGGAATAAGCTGAGAGATCTTTTTTTGTTCAGGAAGAGGTCCCGTGATACCGCTGGCAAGCTGTCAAAGAAGCTTTCAACTATAAATATAGTTGAAGAACTGTTTGAAGAAGGATCAGCCATGCTTGCTGAAAGATTAGGAAATGAGGAGAACTCGGGACAATCAACATCCGGCCTCTTTGTCTGTGCTGTATGCCAAGTTGATCTAGCTCCAAGTGAGGGCATATCTGTCCATGCAGGTTCAATTTTCTCTACAAGCTCGAAGCCGTGGCAAGGTCCTTTTCTATGCTGTGATTGTCGCAATAAGAAGGATGCAATGGAAGGTAAACGTCCAAGTGGAGTTAAAGTGTCATAG 1293 0.4555 MASGEGRRCHHHDLVPLAALLKREMKSERMEKPTVRIGQAAQSKKGEDYFLVKTDCQRVPGNSSTAFSVFAIFDGHNGNAAAVFTKENLLNHVLCALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKRNKLRDLFLFRKRSRDTAGKLSKKLSTINIVEELFEEGSAMLAERLGNEENSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCCDCRNKKDAMEGKRPSGVKVS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0326 430 Pfam Protein phosphatase 2C 62 270 IPR001932 -
Tpr1g0326 430 ProSiteProfiles PPM-type phosphatase domain profile. 29 298 IPR001932 -
Tpr1g0326 430 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 4 429 - -
Tpr1g0326 430 SMART PP2C_SIG_2 52 298 IPR001932 -
Tpr1g0326 430 SMART PP2C_4 26 296 IPR001932 -
Tpr1g0326 430 SUPERFAMILY PP2C-like 42 298 IPR036457 -
Tpr1g0326 430 CDD PP2Cc 44 298 IPR001932 -
Tpr1g0326 430 PANTHER ALPHABET, ISOFORM E-RELATED 4 429 - -
Tpr1g0326 430 Gene3D - 37 302 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0326 Tpr-Chr1 2801641 2805729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0326 1 429 PP2C-type Phosphatase Gene Family AT1G68410 80.046 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0326 - - gmx:100779571 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0326 1 2801641 2805729 Tpr1g0326 1 2801641 2805729 ECH