Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0325 ATGATGGCTTCGGTTAATTTAGAATTTCTCTTACTTTTGTTTTCACAACTCATACTGCTACATGTGTTGGCAGGTGGAGATGAGAATAAGTACCAAGGAGAGTGTCTAGCTTCGTTTAGTTGTGGATATCTTGGCAATATCAGCTTCCCTTTCACTACAACTGAACGCCCGGACTGTGGCTTATTGCCAATACATAATTGTGATGATGATGACCCACAAAAGCCTAAAAGTATCCAATTACAGAAGGAAGGGAAATGGTTTGAGGTTGAAGTTGGAAATCCTCTCGAGTTTCACGGTCGTGGCAGTAGTACTTTTGTTTTTAGAGACGATAAACTCTACAAACTGCTGCAAACCAAAAGTTGTGAAGCTTTCAGATATAATTATACTCTTCCTTCCACCTCTGGCTTTGCTTCTTTTCGTATCAAAACCAATGCAACCCTGTTTGTGTGTAACCATACCCTCCAAGTACACCCTCCAACATATATGCTTATGCATAACTATACAAAGTGCCCCCAATACGATCTCTTCTACCAGCCTTACATTATTGCTGATAATGTGTTTCGGAGTGCTTTTACAGATTGTACAATTGTCCACCTTCCGACTAAAGACATCGCTGATGGTGAAGACCCTTTTACTTTCGTAACTGCTGATATCTCCATTGAAGTAAAAATAACAGAAGAATGTGCATATTGTCACTTCAACCTAACAGGGCAGTGTCAACTTGACAGCAACGGGAGGTTTTATTGTGCTAATGTCACAGTTAGTAAGAGAAAAGGTCTGAGCCAGAATGTTAAACTGGGTTTAGCCATGGTGGCTATTGGATTTGGAGTTGCGGTGCTGATGTTGTTGGCTTACTGCATTAGGACAAAGATCTTCTCTTCCACATTTCTTTTGTTCAGGAAAGAGAATCCAACCCATCAAATTATTGAGCAGTTTTTGAAGGAACATGGACCGCTTCCAGCCGCTAGGTACAGCTATTTAGATGTGAAGAAAATAACAAACTCTTTCAAAAACAAATTAGGCCAGGGAGGATATGGAAGTGTATACAAAGGGAAGTTACATGATGAGCGTACTGTTGCAGTGAAGGTTTTAAGTGAATCAAAAGGTGATGGTGAAGATTTCATTAATGAAGTTGCTAGTATTAGTAGAACTTCACATGTCAACGTCGTTAGACTTTTGGGGTTTTGTTTGGATGGTTCTAAAAAGGCACTATTATATGAATTCATGCCTAATGGATCACTCGAGAAGTTCATATATGAAGAGAAAGATCCATTAAAGAATGATCGCCAATTGGATTGCAAACTATTGTATGATATTGCAGTTGGCGTTGCTCGTGGGTTAGAGTACTTGCACAGAGGCTGCAACACTAGAATCTTGCATTTTGACATAAAACCTCATAATATATTACTAGATGATGATTTTTGTCCTAAAATTTCAGATTTTGGTCTTGCTAAAATATGTCCGAGAAAAGAAAGCATTGTATCCATATTTGGCGCGAGGGGAACACCGGGATATATTGCACCAGAACTGTTCTCCAGAAATTTTGGTGGGGTGTCACATAAGTCGGATGTCTACAGTTATGGAATGATGGTTTTAGAAATGGTTGGTCAAAAAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGTGAGTTATATTTTCCGCACTGGATTTACAAGCGTCTTGAATTGAATCAGGATTTTGGACTAAGGTGTATTAAAAATGAAATTGATGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACCGACCCTTCACATCGGCCAGCAATGCATAAAGTGGTGGAAATGTTGGAAGGGGGCCTTCAAGTGCTGGAAATACCACCCAAACCCTTTATGTCTTCTCCTTCAACATCTTCAATCCATTTATCATCTGAAATATTATGA 1920 0.3896 MMASVNLEFLLLLFSQLILLHVLAGGDENKYQGECLASFSCGYLGNISFPFTTTERPDCGLLPIHNCDDDDPQKPKSIQLQKEGKWFEVEVGNPLEFHGRGSSTFVFRDDKLYKLLQTKSCEAFRYNYTLPSTSGFASFRIKTNATLFVCNHTLQVHPPTYMLMHNYTKCPQYDLFYQPYIIADNVFRSAFTDCTIVHLPTKDIADGEDPFTFVTADISIEVKITEECAYCHFNLTGQCQLDSNGRFYCANVTVSKRKGLSQNVKLGLAMVAIGFGVAVLMLLAYCIRTKIFSSTFLLFRKENPTHQIIEQFLKEHGPLPAARYSYLDVKKITNSFKNKLGQGGYGSVYKGKLHDERTVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALLYEFMPNGSLEKFIYEEKDPLKNDRQLDCKLLYDIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDDDFCPKISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGQKKNIKVEVDCSSELYFPHWIYKRLELNQDFGLRCIKNEIDEEMVRKMTVVSLWCIQTDPSHRPAMHKVVEMLEGGLQVLEIPPKPFMSSPSTSSIHLSSEIL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0325 639 Gene3D Phosphorylase Kinase; domain 1 311 408 - -
Tpr1g0325 639 ProSiteProfiles Protein kinase domain profile. 334 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0325 639 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 637 IPR045874 GO:0004672
Tpr1g0325 639 SUPERFAMILY Protein kinase-like (PK-like) 318 609 IPR011009 -
Tpr1g0325 639 Gene3D Transferase(Phosphotransferase) domain 1 409 622 - -
Tpr1g0325 639 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0325 639 Pfam Protein kinase domain 337 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0325 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Tpr1g0325 639 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Tpr1g0325 639 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 3 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0325 Tpr-Chr1 2780407 2783072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0325 29 639 Receptor kinase-like Gene Family AT5G38260 38.438 2.59e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g0325 Pkinase 5.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0325 - - cam:101490487 946.036