Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0323 ATGTCTTGGCTTTTCATTTTCAAATCATTACTTTTCTCCCTGCTTATGCTTCAGGTCTCAGCTCAAGATGGAAGATGTCCAACATCTTTTAGTTGTGGATATCTTGGCCAGATTACCTTCCCTTTCACAGTCACAGAAAGCCCTCACTGTGGCATTTTGGCCATAAGTGGTTGTGATAATAACGGTATAGCTTATCCCAAAAGCATCCAACTAGGCAAGCGACCATCAAATCAGTCTTTCATAGTTACATACGTGGATCATGATACCATCACAGTCAGAGATGATGCTCTACGGGAGAAGTTGCATTTAAAAGATTGTCAGGCCTTTAACAACTTTACTGTTCCTCCCACCTCTCCTTTAGCATCTTTCTATATCAAATATAATATAACTATGTTCAAGTGCAACCGCTCCCTTAGTATCACCCTTCCGAGAAATTTTTATTTTTATAAGTATACAAACTGTTCTGGTTATAATCTCTATTACGACCTTCTAAATAGAGATGGTTTTAAAGTGCCAAGCTCTTTGGCACAGTGTACACAGTGTCAGGTTGCAATAAGAGACAGCCCCACAACTGACCCCTTTAATTTTGTATCTCCTGAGATCTCCATTGAAGTACAATTATCTGATGATTGTAATAAGTGTCTTCATCACCAAGGGGGGCAATGTCAACTTGACAATCAAGGAAAATTCTTCTGTGCCCAAGGGAGTAGAACTAGAAACTGGCCTGTGAAAATATTGGCGCTAGGAGTTGGAGTAGTTGTTACAGTAGTAGCTCTATTGCTACTAGTGGTCAAGAATCACAAGATCTACTATACAAGATGGAAGAATAAAAATTCAACCAATCTAGTAATTGAGGTCTTTTTGAAGAAACATGGATCCCTTCAAACCAAGAGGTATTGTTACTCTGAGATAAAGAAAGTGACCAACTCCTTTAAAAATAAATTAGGCCAAGGAGGATTCGGAAGTGTATACAAAGGACGGTTAGATGATGGACGTTATGTTGCAGTGAAGATCCTAAATGAATTGAAGGATAGTGGAGAGGAATTCATGAATGAAGTTGCAAGTATATGTGGAACTTCTCATGTTAACATTGTCAATCTTCTTGGGTTCTGTTTGGAAGGTTCCAAACGAGCTTTAGTTTACGAGTTTATGCATAATGGCTCTCTTGAGAAGTTTATCTTTGAGGAAAATGACCATATTCCAGATTTCCAATTGCACTGCCAAACTTTGTACCACATCGCAATTGGTGTAGCTCGAGGGCTAGAATACCTGCACAAAGGCTGCAATACTAGAATATTACATTTTGACATTAAGCCTCATAACATTCTTTTGGACAAGAATTTCAACCCCAAAATTTCAGATTTTGGACTTGCAAAGATTTGTGCAAGAAAAGAAAGTATGGTATCAATGGTATCGATATTTGGTGCCAGAGGAACGGCGGGATATATTGCCCCCGAGGTATTTTCTAGGAATTTTGGTGCAGTGTCACATAAGTCTGATGTGTACAGTTATGGAATGATGGTTATGGAAATGGTTGGAAGGAGAAAAAATATTAACACTGAAGTTGACCGATCGAGTGAAATATATTTTCCTCATTGGATTTACAATCGTCTTGATTCTAATCAAGATCTTGGTCTGCGGAATATAAGAAATGAAATGGATGACGAAAAGGTGAGAAAGATGACAATAGTAGCTCTATGGTGCATACAAACCAACCCTTCAACTCGACCTGATATAAGTAAAGTGGTGGAGATGTTAGAAGGTAGAGTTGAGTCGTTGCAAATGCCACCTAAACCCTTTTTGTCTTCTCCTCCTTCAAACTCTCCGGTCCATTTCTCAACTGGAACACAAACTCTAGAGTCCATGAGAATGCTAGATGCAGAACAACTGGAGCATTCCAGCTAG 1905 0.3895 MSWLFIFKSLLFSLLMLQVSAQDGRCPTSFSCGYLGQITFPFTVTESPHCGILAISGCDNNGIAYPKSIQLGKRPSNQSFIVTYVDHDTITVRDDALREKLHLKDCQAFNNFTVPPTSPLASFYIKYNITMFKCNRSLSITLPRNFYFYKYTNCSGYNLYYDLLNRDGFKVPSSLAQCTQCQVAIRDSPTTDPFNFVSPEISIEVQLSDDCNKCLHHQGGQCQLDNQGKFFCAQGSRTRNWPVKILALGVGVVVTVVALLLLVVKNHKIYYTRWKNKNSTNLVIEVFLKKHGSLQTKRYCYSEIKKVTNSFKNKLGQGGFGSVYKGRLDDGRYVAVKILNELKDSGEEFMNEVASICGTSHVNIVNLLGFCLEGSKRALVYEFMHNGSLEKFIFEENDHIPDFQLHCQTLYHIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDKNFNPKISDFGLAKICARKESMVSMVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVMEMVGRRKNINTEVDRSSEIYFPHWIYNRLDSNQDLGLRNIRNEMDDEKVRKMTIVALWCIQTNPSTRPDISKVVEMLEGRVESLQMPPKPFLSSPPSNSPVHFSTGTQTLESMRMLDAEQLEHSS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0323 634 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 6 615 - -
Tpr1g0323 634 SMART serkin_6 309 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0323 634 Gene3D Transferase(Phosphotransferase) domain 1 384 600 - -
Tpr1g0323 634 Gene3D Phosphorylase Kinase; domain 1 286 383 - -
Tpr1g0323 634 SUPERFAMILY Protein kinase-like (PK-like) 293 587 IPR011009 -
Tpr1g0323 634 Pfam Protein kinase domain 312 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0323 634 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 615 IPR045874 GO:0004672
Tpr1g0323 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Tpr1g0323 634 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Tpr1g0323 634 ProSiteProfiles Protein kinase domain profile. 309 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0323 Tpr-Chr1 2772042 2775308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0323 200 599 Receptor kinase-like Gene Family AT5G38260 47.330 8.11e-121 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g0323 Pkinase 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0323 - - gmx:100786495 710.294