Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0322 ATGGTTTCACAGCGCCTTTTCTTGTTTTCATGCTTTGTTACACAACTGCTACTAGCATCAGGTAACTGTCCATCTTCAATTAACTGCGGATTTCTCGGAGAAATTGAGTTTCCTTTTACCAGCACAGAACATCCAAATTGTGGCATGTTAGTAATACATGGCTGTGATGACTATGAACCACAATCCAAAAAAATCATTCAAAATAACAAAAGATGGTTCGATGTTCTCAAAATCGAATCATTCACAATCACAATTCGAGATGACCAACTTCATGACTTGTTACTACAAAGAAGCTGCAATATTCTAACATACAATTCTATGTTCACGGTCAACACGCCTTTGGTATTTTCTCGTCTAGAAAATCCGGTAACTGTTTACGGATGCAACAGTAACAACACACTCGATCTACAACGATACTATTCCGTTTCTAATTCTACTTCGATTTGTAGAAACGAAAACAATACTTTGAATGGTGTTTCAGATTCAGATATAAAGAATAATAAAGCTATTGTGGTTATAATTTATGATACTATCTCTTCAAACTCTAATCATCTTAAAGGATGTTCAAATGTTGATCTTCCAACTGGTTTCAAGGTTAACCATCTTGATCCAGATGATCTTTTTAACTTCCTAAGTGGTGATATTGCAATCAAAATACAAGTTTCTCAGAATTGTTCAACCTGTCATGATCTTTATGGGGGTCAATGTCGACTTGATAACACCGGAAACTTTTATTGCCACCAAGGGAAATCTAAAAAGACACATCTTACAGTGGCAGCAGCTACATCTTCTGCCGGAGTACTTGGAGTTCTGGTTTTTTTGGCTTGGTTCTTAAGAAGACGCTTCATCAACAATAAAAACCCTCCATACCAAATAATTGAGTTGTTTCTGAAAAACCATGGTCACCTTGCAGCTAAAAGATACACTTATGCAGAGATAAAGAAAGCAACAAATTCATTCAAAAACAAACTAGGTCAAGGAGGCTATGGCAGTGTATACAAAGGGAAATTACAAGATGGAAGTCTCGTGGCAGTAAAAGTATTAAACGAATCTCACGGTAACGGTGAAGAGTTCATCAATGAGGTTGCTAGTATTAGTGTCACTTCTCATGTTAACATTGTTAGTTTGTTAGGATTCTATCTAGAAGGTTCTAAAAGAGCTTTGATATATGACTACATGCCTAATGGTTCACTTGAGAAGTTCATATATGAAGACAAAGATCCATTAAATCTAAATCTTCAATTGAGTTGCAAAACTATCTACAATATTGCAATTGGCGTTGCTCGAGGATTAGAGTATTTGCACAAAGGTTGCAATACTAAAATCTTGCATTTTGATATAAAACCTCATAACATATTGCTAGACGATGATTTTTGTCCGAAGGTTTCAGATTTTGGACTCGCAAAAGTATGTCCAAGAAAAGACAGTATCATATCCTTATTAGGTGCCAGAGGCACTGCAGGATACATTGCTCCAGAAGTGTTCTCTAGAAACTTTGGCGGCGTCTCCCATAAATCCGATGTATACAGCTATGGAATGATGGTTTTAGAAATGGTTGGAGGAAAACAGAATAACAATATCATTGATGTTGAACGGTCGAGTGAAATTTATTTTCCGCACTGGGTTTACAAGCGAATTGAACTGAATCAAGAACCTAGGTTACGAAGCATTAAAAGTGAATTTGATAAAAAGATTGTACAAAAGATGATTATAGTAAGCTTATGGTGCATCCAAACTGATCCATCACATAGGCCTGCAATGAGTAAAGTGGTAGATATGATGGAAGGTAGCTTGGAATCTTTGCAAATACCACCAAAACCATGTCTCTCTTCACCTCCTAGGTCACCCTCAAGATCATCAGATTATAACTCTCACACATCTCAGGATTTGCATCAATCAGGAACAGTCCTTACCACTGAATGTGAACCTCTAATCATCCTTGGTAGAGGTAGTGGGAGACTACCATCCCCAGAAGATGGTGAAACAATATTGTTGTCAAATGCAAGATTTGAGGAGGAAAGTAGTATAGTATAG 2034 0.3687 MVSQRLFLFSCFVTQLLLASGNCPSSINCGFLGEIEFPFTSTEHPNCGMLVIHGCDDYEPQSKKIIQNNKRWFDVLKIESFTITIRDDQLHDLLLQRSCNILTYNSMFTVNTPLVFSRLENPVTVYGCNSNNTLDLQRYYSVSNSTSICRNENNTLNGVSDSDIKNNKAIVVIIYDTISSNSNHLKGCSNVDLPTGFKVNHLDPDDLFNFLSGDIAIKIQVSQNCSTCHDLYGGQCRLDNTGNFYCHQGKSKKTHLTVAAATSSAGVLGVLVFLAWFLRRRFINNKNPPYQIIELFLKNHGHLAAKRYTYAEIKKATNSFKNKLGQGGYGSVYKGKLQDGSLVAVKVLNESHGNGEEFINEVASISVTSHVNIVSLLGFYLEGSKRALIYDYMPNGSLEKFIYEDKDPLNLNLQLSCKTIYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDDDFCPKVSDFGLAKVCPRKDSIISLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGKQNNNIIDVERSSEIYFPHWVYKRIELNQEPRLRSIKSEFDKKIVQKMIIVSLWCIQTDPSHRPAMSKVVDMMEGSLESLQIPPKPCLSSPPRSPSRSSDYNSHTSQDLHQSGTVLTTECEPLIILGRGSGRLPSPEDGETILLSNARFEEESSIV* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0322 677 MobiDBLite consensus disorder prediction 602 634 - -
Tpr1g0322 677 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Tpr1g0322 677 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 29 632 - -
Tpr1g0322 677 MobiDBLite consensus disorder prediction 613 634 - -
Tpr1g0322 677 Gene3D Phosphorylase Kinase; domain 1 297 392 - -
Tpr1g0322 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Tpr1g0322 677 Gene3D Transferase(Phosphotransferase) domain 1 393 603 - -
Tpr1g0322 677 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 632 IPR045874 GO:0004672
Tpr1g0322 677 SMART serkin_6 318 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0322 677 ProSiteProfiles Protein kinase domain profile. 318 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0322 677 Pfam Protein kinase domain 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0322 677 SUPERFAMILY Protein kinase-like (PK-like) 302 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0322 Tpr-Chr1 2769112 2771811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0322 258 633 Receptor kinase-like Gene Family AT4G18250 52.865 3.34e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g0322 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0322 - - gmx:100785979 801.586