Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0305 ATGGCCTATTTTGTCAAATCGTTGGGTTACTTCGCTCAATGGAATGTGAATGGCAACTACTTGAATCAGAATGAATCCGATCACATATCCGAGGCATTCAAAATTGCTATGTGGCAATGGAGAATAATGATATCCAGATCTCGCGTTGTGGGTGCTCAGATTATTTCATTGTATCCAATGGAGTACAGTTATAAAATTGAGGGTGGTTTAAATCCCCCTATTGCTTCTTTCCAAATTAAGATTTCGGACACTATCGGAAAACATAGTCAAATTCTAGCTATGTCAGAAGAAGTTAGAGACTGGCAGTTCAACTTTCCAGGGCGAGGTACTTTTACTTGGATATGTGATATTGAGCTGCCCGAGGCATACTACATTGAGTTAGAATTCTCACATTTGCAATCTTCAAACACAGCCAATGGAGAATCTTTCCGCTTTAATGGATATAAGCGATGTAAATTATCATCCCTTAATCGATTGATTCAAGTAGATAAAGACATCACAATCTATGTAGAGGCATCTAAACAAACTATTATGGCCCATCAGTTTGCTCTTGGTTCAAAGTCGAGTGTCTTTAAGCAAATGTTCAAGGAGGGGTCTGTTGATACTATTACCATCTCAGATATGGCAACTATACCTTGTCAAAAATTTATAGATTACTTCTACGATATCTTGAGAGATGAGGATCTTCTGAATTACAGTCGGGATTTATTAGAAGCTGCAAAGAAATATGATGTAACTGATATGATAAAGGATATTGAGAAAAGGCTCGCAAGGGATATCAATACCCAAAATGTAGTTGAGAGGATGAAGATAGCATACCGCTATGAATTGGAGACTTTGAGAGATCGGTGTGTGCGTTTAATTTTGGAGTTTAAAAAATTTTGGACCATTCGAATGGACCTTTATGATTTCCTAGAATCGGTTGATAGGGAGGTAGTTCGCAAAGTATTTCGTGATTTTTGTAGTGTTATTGCTGCTATCGAGGGACTTTAA 993 0.3756 MAYFVKSLGYFAQWNVNGNYLNQNESDHISEAFKIAMWQWRIMISRSRVVGAQIISLYPMEYSYKIEGGLNPPIASFQIKISDTIGKHSQILAMSEEVRDWQFNFPGRGTFTWICDIELPEAYYIELEFSHLQSSNTANGESFRFNGYKRCKLSSLNRLIQVDKDITIYVEASKQTIMAHQFALGSKSSVFKQMFKEGSVDTITISDMATIPCQKFIDYFYDILRDEDLLNYSRDLLEAAKKYDVTDMIKDIEKRLARDINTQNVVERMKIAYRYELETLRDRCVRLILEFKKFWTIRMDLYDFLESVDREVVRKVFRDFCSVIAAIEGL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0305 330 PANTHER OS08G0495500 PROTEIN-RELATED 2 322 IPR044714 -
Tpr1g0305 330 PANTHER OS08G0495500 PROTEIN 2 322 - -
Tpr1g0305 330 SMART BTB_4 164 260 IPR000210 GO:0005515
Tpr1g0305 330 Pfam BTB/POZ domain 165 256 IPR000210 GO:0005515
Tpr1g0305 330 Gene3D Potassium Channel Kv1.1; Chain A 158 296 IPR011333 -
Tpr1g0305 330 ProSiteProfiles BTB domain profile. 164 222 IPR000210 GO:0005515
Tpr1g0305 330 CDD BTB_POZ_ZBTB_KLHL-like 165 243 - -
Tpr1g0305 330 SUPERFAMILY POZ domain 143 288 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr1g0305 BTB 1e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0305 K10523 - oeu:111395792 169.474