Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0279 ATGGGTCTCCTTCAAATCACAAAAAAATCAATCTTTTTCACTCTTTTTGCTATACTCATTCCAATAATTACTACAAAACTCTTTTCTTCATATTCATCTCTATCAACTTCAATTGCTAGTGTCTCTCTCATAATCTTATTGTCATACATATACTTAACTCATTCCAAGCAAAATTCTTCACCTCCAAGCCCTTTTTCTGTTCCTATATTTGGAAATTGGCTTCAAGTTGGCAATGATCTTAATCATCGTATTCTTGCATCCATGTCACAAACTTATGGATCACTTTTCCTACTCAAACTTGGTTCCAAAAACTTGGTTGTTGTCTCTGATCCAAACCTTGCAACACAAGTACTTCATTCACAAGGTGTCGAATTCGGTTCTCGTCCTCGTAATGTTGTCTTTGATATCTTCACTGGTAATGGACAAGACATGGTTTTCACTGTCTATGGTGATCATTGGCGTAAAATGCGAAGAATCATGACATTGCCATTTTTCACTAACAAAGTTGTGAATAATTATAGTAACATGTGGGAACAAGAGATGGATTTAGTTGTGAAAGATCTTAAGGCTAATGAGATTGTTAGAAGTGAAGGGATTGTTATAAGAAAACGTCTTCAATTGATGTTGTATAATATCATGTATAGAATGATGTTTGATTCCAAATTTGAGTCTCAAGAAGATCCTTTATTCATTCAAGCTACAAGGTTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAGTACAATTATGGTGATTTTATACCTTTGCTTAGGCCATTTTTGAGAGGGTACCTTAACAAGTGCAAAGACTTGCAAACTAGGAGGCTTGCATTTTTCAACAACTACTTTATTGAGAAGAGGAGAAAAACAATGGCAGCCAATGGGGAGAAGCATGAGATAATATGTGCAATTGATCACATAATAGATGCTGAGATGAAAGGAGAAATAAGTGAAGAGAATGTGACTTACATAGTAGAAAACATAAACGTTGCTGCAATAGAGACAACACTATGGTCAATGGAATGGGCAATAGCTGAGTTAGTGAATCATCCAAAAGTCCAAACCAAAATACGCGACGAGATATCAGAAGTGCTTAAAGGCGAACAAGTTACAGAATCAAATCTACACCAATTACCATATTTACAAGCCACATTGAAAGAAATATTAAGGTTGCATACACCAATACCACTATTAGTACCTCACATGAATCTTGAAGAAGCTAAGTTAGGAGAGTATACTATTCCTAAAGAGTCTAAGGTAGTTGTTAATGCATGGTGGCTTGCAAATAATCCATTATGGTGGGAAATACCAGAAGAGTTTAGGCCAGAGAGATTTTTGGAAGAGGAAAATGGAATTGATGCTGTTGCTGGTGGAGGGAAAGTTGATTTTAGATTTGTGCCATTTGGTGTTGGAAGAAGAAGTTGTCCTGGAATTATACTTGCATTGCCAATATTGGGATTGGTTATTGCAAAGTTGGTGTCAAATTTTGAGATGAATGGTCCAAATGGGACTAAGATTGATGTTAGTGAAAAAGGTGGACAATTTAGTTTGCATATTGCTAACCATTCCACTGTTTTGTTCCAACCAATTCATTAG 1599 0.3596 MGLLQITKKSIFFTLFAILIPIITTKLFSSYSSLSTSIASVSLIILLSYIYLTHSKQNSSPPSPFSVPIFGNWLQVGNDLNHRILASMSQTYGSLFLLKLGSKNLVVVSDPNLATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVNNYSNMWEQEMDLVVKDLKANEIVRSEGIVIRKRLQLMLYNIMYRMMFDSKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYFIEKRRKTMAANGEKHEIICAIDHIIDAEMKGEISEENVTYIVENINVAAIETTLWSMEWAIAELVNHPKVQTKIRDEISEVLKGEQVTESNLHQLPYLQATLKEILRLHTPIPLLVPHMNLEEAKLGEYTIPKESKVVVNAWWLANNPLWWEIPEEFRPERFLEEENGIDAVAGGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVSNFEMNGPNGTKIDVSEKGGQFSLHIANHSTVLFQPIH* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0279 532 SUPERFAMILY Cytochrome P450 61 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 Gene3D Cytochrome P450 52 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PANTHER OS02G0467000 PROTEIN 7 532 - -
Tpr1g0279 532 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 7 532 - -
Tpr1g0279 532 Pfam Cytochrome P450 61 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Tpr1g0279 532 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g0279 532 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0279 Tpr-Chr1 2325030 2327182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0279 38 530 Monolignol Biosynthesis Gene Families AT2G30490 63.306 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0279 K00487 - gmx:100812188 830.861