LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g0262	ATGGCAATAGGTAGTTCAATTGGTGTTCATGGTTGGGGAGACATGAAGAGTCTCACCGGCCAGTTCGTCACTGGACGGTGGTTCGTCATATTTGCTTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCTTATACTCCCCCGTAATAAAAAAAGAACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTGCGGTACCAACGTTGGCGTCCTTTCAGGACTAATCAATGAACTCTATCCACCTTGGATAGTTTTAGCAATAGGTGCTATTCTCAATTTTTTTGGTTACTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTTCATAGGTGCTAATTCTCAATCTTTTGCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGTGGCGCGGTTTTGGGAGTTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTACTCTGCTATTTATTATGATGATTTAAAGGCTTTGATTTTGTTTATAGGTTGGTTTCCTGCTGCTATTTCTTTTGCTTTTCTTCGAACAATTCGTTATATGAAACCTGTTCGACAAGTTAACGAGCTTAAGGTTTTTTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGTTTTTTGTTGGTTATGATCATAATTCAAAAGAAGGTTAGTTTCTCACAGAGTGAATTTGGTGTAAGTGCTGCTGTGGTAATTTTCTGCCTTTTTCTTCCACTTGTTGTTGTTTTTATTGAAGAAAACAAGATTTGGAAGAGTAAAAAATTTGCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACACAAAGTGAAACTGTTACTGAAACTGAAAAAGAAAAAGAAAAAGTCAACTCTGTTGTTACAGTTCCAGCACCAAAAAAAGATACAAAATGGTATGAAGATGTGTTTAATCCACCAGCAAGAGGTGAGAATTATACAATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTAGCAAGTATTTGTGGTATTGGTGGAACATTGACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGTATAAGCACTTTTGTGTCATTAGTAAGTATTTGGAATTATTTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTATAGATTTCCCCGTCCTCTTATGCTTACTTTAACAATGTTTGTCTCTTGTATTGGACATCTTTTGATAGCATTTGATGTTAAAAATGGTCTCTACATAGCTTCTGTGATTATTGGTTTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTTGCAAGTCCACTTGGGTTATATGTCCTTAATGTTAGGATCACTGGTCATATATATGACAAAGAAGGTACAAAACAATTAGAAGCACTTGGACTAAAGAGAAAAGAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATCATTGCAGCTGCTACTTTTTTTGGTGCTGCTATTTCACTTATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTCAGAGAAGAAGCTATGGTGACAGAAGCTGAAATGTTGGAGAAAAAGAACATGGAAAAGACAGAAGAAGATGCCAAAGTTGGTCAGCAACATGTGGTAACATCTTAG	1809	0.356	MAIGSSIGVHGWGDMKSLTGQFVTGRWFVIFASFLIMAAAGATYMFGLYSPVIKKELGYDQSTLNLLSFFKDCGTNVGVLSGLINELYPPWIVLAIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYIFIGANSQSFANTGSLVTCVKNFPESRGAVLGVLKGYVGLSGAIITQLYSAIYYDDLKALILFIGWFPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYISLGLAGFLLVMIIIQKKVSFSQSEFGVSAAVVIFCLFLPLVVVFIEENKIWKSKKFALVDPSPVKIVTQSETVTETEKEKEKVNSVVTVPAPKKDTKWYEDVFNPPARGENYTILQALFSIDMLILFVASICGIGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTMFVSCIGHLLIAFDVKNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRITGHIYDKEGTKQLEALGLKRKEGQQLNCVGVDCFKLSFIIIAAATFFGAAISLILVARTRKFYKGDIYKRFREEAMVTEAEMLEKKNMEKTEEDAKVGQQHVVTS*	603

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr1g0262	602	Pfam	Nodulin-like	26	271	IPR010658	-
Tpr1g0262	602	Gene3D	MFS general substrate transporter like domains	21	216	IPR036259	-
Tpr1g0262	602	Gene3D	MFS general substrate transporter like domains	339	561	IPR036259	-
Tpr1g0262	602	PANTHER	MFS TRANSPORTER	9	601	-	-
Tpr1g0262	602	SUPERFAMILY	MFS general substrate transporter	25	559	IPR036259	-
Tpr1g0262	602	CDD	MFS_Mch1p_like	25	546	-	-
Tpr1g0262	602	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	9	601	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g0262	Tpr-Chr1	2196784	2199060	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g0262	13	571	Nodulin-like Gene Family	AT2G39210	70.714	0.0	814

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g0262	-		-	pvu:PHAVU_007G024800g	952.584

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr1g0262	1	2196784	2199060	Tpr1g0262	1	2196784	2199060	ECH

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