Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0262 ATGGCAATAGGTAGTTCAATTGGTGTTCATGGTTGGGGAGACATGAAGAGTCTCACCGGCCAGTTCGTCACTGGACGGTGGTTCGTCATATTTGCTTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCTTATACTCCCCCGTAATAAAAAAAGAACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTGCGGTACCAACGTTGGCGTCCTTTCAGGACTAATCAATGAACTCTATCCACCTTGGATAGTTTTAGCAATAGGTGCTATTCTCAATTTTTTTGGTTACTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTTCATAGGTGCTAATTCTCAATCTTTTGCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCCGAATCTCGTGGCGCGGTTTTGGGAGTTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTACTCTGCTATTTATTATGATGATTTAAAGGCTTTGATTTTGTTTATAGGTTGGTTTCCTGCTGCTATTTCTTTTGCTTTTCTTCGAACAATTCGTTATATGAAACCTGTTCGACAAGTTAACGAGCTTAAGGTTTTTTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGTTTTTTGTTGGTTATGATCATAATTCAAAAGAAGGTTAGTTTCTCACAGAGTGAATTTGGTGTAAGTGCTGCTGTGGTAATTTTCTGCCTTTTTCTTCCACTTGTTGTTGTTTTTATTGAAGAAAACAAGATTTGGAAGAGTAAAAAATTTGCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACACAAAGTGAAACTGTTACTGAAACTGAAAAAGAAAAAGAAAAAGTCAACTCTGTTGTTACAGTTCCAGCACCAAAAAAAGATACAAAATGGTATGAAGATGTGTTTAATCCACCAGCAAGAGGTGAGAATTATACAATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTAGCAAGTATTTGTGGTATTGGTGGAACATTGACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGTATAAGCACTTTTGTGTCATTAGTAAGTATTTGGAATTATTTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTATAGATTTCCCCGTCCTCTTATGCTTACTTTAACAATGTTTGTCTCTTGTATTGGACATCTTTTGATAGCATTTGATGTTAAAAATGGTCTCTACATAGCTTCTGTGATTATTGGTTTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTTGCAAGTCCACTTGGGTTATATGTCCTTAATGTTAGGATCACTGGTCATATATATGACAAAGAAGGTACAAAACAATTAGAAGCACTTGGACTAAAGAGAAAAGAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCTTTCATTATCATTGCAGCTGCTACTTTTTTTGGTGCTGCTATTTCACTTATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTCAGAGAAGAAGCTATGGTGACAGAAGCTGAAATGTTGGAGAAAAAGAACATGGAAAAGACAGAAGAAGATGCCAAAGTTGGTCAGCAACATGTGGTAACATCTTAG 1809 0.356 MAIGSSIGVHGWGDMKSLTGQFVTGRWFVIFASFLIMAAAGATYMFGLYSPVIKKELGYDQSTLNLLSFFKDCGTNVGVLSGLINELYPPWIVLAIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYIFIGANSQSFANTGSLVTCVKNFPESRGAVLGVLKGYVGLSGAIITQLYSAIYYDDLKALILFIGWFPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYISLGLAGFLLVMIIIQKKVSFSQSEFGVSAAVVIFCLFLPLVVVFIEENKIWKSKKFALVDPSPVKIVTQSETVTETEKEKEKVNSVVTVPAPKKDTKWYEDVFNPPARGENYTILQALFSIDMLILFVASICGIGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTMFVSCIGHLLIAFDVKNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRITGHIYDKEGTKQLEALGLKRKEGQQLNCVGVDCFKLSFIIIAAATFFGAAISLILVARTRKFYKGDIYKRFREEAMVTEAEMLEKKNMEKTEEDAKVGQQHVVTS* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0262 602 Pfam Nodulin-like 26 271 IPR010658 -
Tpr1g0262 602 Gene3D MFS general substrate transporter like domains 21 216 IPR036259 -
Tpr1g0262 602 Gene3D MFS general substrate transporter like domains 339 561 IPR036259 -
Tpr1g0262 602 PANTHER MFS TRANSPORTER 9 601 - -
Tpr1g0262 602 SUPERFAMILY MFS general substrate transporter 25 559 IPR036259 -
Tpr1g0262 602 CDD MFS_Mch1p_like 25 546 - -
Tpr1g0262 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0262 Tpr-Chr1 2196784 2199060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0262 13 571 Nodulin-like Gene Family AT2G39210 70.714 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0262 - - pvu:PHAVU_007G024800g 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0262 1 2196784 2199060 Tpr1g0262 1 2196784 2199060 ECH