Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0261 ATGGCAGTAGGTAGTTCAATTGGTGTTCATGGTTGGGGAGACATGAAGAGTCTCACCGTCCAGTTCGTTACTGGACGGTGGTTCGTCATATTTGCTTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGCTTATACTCTGGCGATATAAAAACAGCACTTGGTTATGACCAAAGCACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAACGTTGGTGTCCTTTCAGGACTAATCAATGAACTCTATCCACCTTGGGTAGTTTTAACAATAGGTGCTATTCTTAATTTCTTTGGTTACTTCATGATTTGGTTATCAGTTACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTGCATAGGTGCTAATTCTCAATCTTTTGCAAACACTGGTTCACTTGTTACTTGTGTTAAGAATTTCCCTGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTTAGTGGTGCAATTATCACACAACTTTACTCTGCTATTTATTATGATGACACAAAGGCTTTGATTTTGTTTATAGGTTGGCTCCCTGCAGCTATTTCTTTCGCTTTTCTTCGAACTATTCGATATATGAAACCTGTTCGACAAGTTAACGAGCTTAAGGTTTTTTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGTTTTTTGTTGGTTATGATCATAATCCAGAAGAAGGCTACTTTCTCACAGAGTGAATTTGGTGTAAGTGCTGCTGTGGTAATTTTCTTACTTTTTCTTCCACTAGCTGTTGTTTTTATTGAAGAGAACAAGATTTGGCAGAGTAAAAAATTAGCTTTGGTTGATCCTTCACCAGTGAAAATAGTAACACAAAGTGAAACTGTTGCTGAAACTGAAAAAGAAAAAGTCAACTCTGTTGTTACAGTTTCAGCTCCAAAAAAAGATACAAAATGGTATGAAGATGTGTTTAATCCGCCAGCAAGAGGAGAGGATTATACAATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGTGGAACATTGACAGCAATTGATAATCTTGGTCAAATAGGAACATCACTTAGATATCCAAAGAAAAGTATAAGCACTTTTGTTTCATTAGTAAGTATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCAGAACATTTTCTAACAAAGTATAGATTTCCTCGTCCGCTTATGCTTACTTTAACACTCTTTGTCTCTTGTATTGGACATCTTTTGATAGCATTTGATGTTCCAAATGGTCTCTACATAGCTTCAGTGATTATTGGCTTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATAATTTCAGAACTTTTTGGACTTAAATATTATGCAACTTTGTATAATTTTGGAAGTGTTGCAAGTCCACTTGGGTTATATGTTCTTAATGTGAAGATCACTGGTCATTTATATGACAAAGAAGGTACCAAACAATTAGAAGCACTTGGACTAAGGAGAATAAAAGGACAACAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTGTCTTTCATTATTATTACAGCTGCTACTTTTTTTGGTGCTGTTTTTTCACTTCTTTTGGTGGCTAGAACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTCAGAGAAGAAGCCATGGTGACAGAAGCTGAAATGTTGGAGAAAAAGAACATGGTAAAGACAGAAGAAGATGCCAAAGTTGGTCAGCAACATGTGGTGACATCTTAG 1803 0.3638 MAVGSSIGVHGWGDMKSLTVQFVTGRWFVIFASFLIMAAAGATYMFGLYSGDIKTALGYDQSTLNLLSFFKDFGSNVGVLSGLINELYPPWVVLTIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLRTIRYMKPVRQVNELKVFYNFLYISLGLAGFLLVMIIIQKKATFSQSEFGVSAAVVIFLLFLPLAVVFIEENKIWQSKKLALVDPSPVKIVTQSETVAETEKEKVNSVVTVSAPKKDTKWYEDVFNPPARGEDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTLFVSCIGHLLIAFDVPNGLYIASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEGTKQLEALGLRRIKGQQLNCVGVDCFKLSFIIITAATFFGAVFSLLLVARTRKFYKGDIYKRFREEAMVTEAEMLEKKNMVKTEEDAKVGQQHVVTS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0261 600 Gene3D MFS general substrate transporter like domains 339 559 IPR036259 -
Tpr1g0261 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 599 - -
Tpr1g0261 600 SUPERFAMILY MFS general substrate transporter 25 557 IPR036259 -
Tpr1g0261 600 PANTHER MFS TRANSPORTER 9 599 - -
Tpr1g0261 600 CDD MFS_Mch1p_like 25 544 - -
Tpr1g0261 600 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0261 Tpr-Chr1 2184292 2186360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0261 13 569 Nodulin-like Gene Family AT2G39210 71.964 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0261 - - pvu:PHAVU_007G024800g 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0866 6 7457839 7460189 Tpr1g0261 1 2184292 2186360 ECH
Tpr1g0261 1 2184292 2186360 Tpr1g0261 1 2184292 2186360 ECH