Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0220 ATGGAGATTTCTTCATTCCCTACTTTCAAACCGTTTTCCAATTCTTCCTTATTCCATTTTAACTCCAATCAACTTCGCTGTCAATGCTCTCTTTCTCTTCCTCACTGCGATTATGGCTTTCGTCGGAGTCGCAATTCAAAACCGTTTCTACAGATCAGAATATGCTCGGAGAAAGTTCCGTCGAACGGTTATGGAGGAATTGATAATGGAGAAACTAAATCCGATTTCGTCGAAGTCATTGCCATTGGCGGTAGGAAGGATGCTGTTCTTGATTCCTGCTTAAACTCGCCGTTTCAGTTGTCTTCTCTGCGCTTTTGGAATGTCATTGTGAAAGATTCACAAGAGGTGCAATTACAGCAAAGGTCTACTAAAGAAGAACCTTATCCAAGAATTGTCGAACCCCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGACCGGACCACACTGTCGCTGATGACATTTTTGAAACTGTAAGGTCCACAAATGGACTCACGGTTGCTGTAGTTTTGAAGCCTTTTAGCTTTGAAGGGATAAGACGAAAAGATGAGGTAAAAGCTTTGATGGGGAAGCTTAAGGAGAATACTAATTTACTTATCGAAATTGATATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCCGAAATGCACAAAAAATTTATAGATAGATTGCACAGTAGCATGAAAGAAACATGCAATTCAGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATGAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGTAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGAGAGCGATATAGCAGTATTTTTGCGTACTTTCCGTCAAACAACTGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTAGAGCCCAACCTACTGATCACGACTGTCCTTACACTTGGCTTAACCGTGCAACAACCTTCCCAGAATAGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCGTGTTTTTAGCTTTTGGGGAAGGCATAGTCAACAACAAATTGTCTATGGGAAAGAGGATGCAGTATCTTCTCATGAAATGATAAGATCTCATGACAGTGATGAGGGGGAAAATAGGATTACTCCCAGTATTGTTGACGAAAGATCTGACAAGCACTATACAGAATTGGAGCCAGACGTGAGCAACAACAGCTCAAAGTTGTCTGCTTTGAGGGATTCTGAAAAAAATGAAGATTTATTTGACACCATAGCCAATTGTCCTATCCCTTATGAATCCATTAATGAAGAAGGCGACTCAGCTTTTCAGAGGGAGCAGCTTGGAAAATGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGTCCCAAGAAAGGGAAGCTGATGCTACACCAATGGTTGATAACCTAAGCATATTCCACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTTTAGAAATCACATTTAGGTCAAAAAAGCATGAGCCGGATGCAGGTGTAGAAGCAGTGATGGAATTTACATCTTCACTTTTGAAGGCAAAACATGCTAATAGTAATAAACCAAAGAAGCACGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGCGGAAGATACAAGGGGCGGTGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTATGACGGGTTATGGCACAGTGGCAAGAGATCGGGTCCAGGAACATTCTATTTCAAGAATGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGACATGGGCAGTTTTTTTGTGTGAATGCAAATGGAACGAGGTACACTGAAACTTGGGAACACGGTGTTCTTTTAGACAGCAAGCGTTTAGATAGATGA 2250 0.4151 MEISSFPTFKPFSNSSLFHFNSNQLRCQCSLSLPHCDYGFRRSRNSKPFLQIRICSEKVPSNGYGGIDNGETKSDFVEVIAIGGRKDAVLDSCLNSPFQLSSLRFWNVIVKDSQEVQLQQRSTKEEPYPRIVEPPVFMKSCSKTIVLVASAGYGPDHTVADDIFETVRSTNGLTVAVVLKPFSFEGIRRKDEVKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHKKFIDRLHSSMKETCNSEIIKILECYKEARIGFGAAYNMKTSILQSIFDCPFLGVSLKDPNSVVICIIACSEPINESDIAVFLRTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGLTVQQPSQNSGILSKLALHFPRVFSFWGRHSQQQIVYGKEDAVSSHEMIRSHDSDEGENRITPSIVDERSDKHYTELEPDVSNNSSKLSALRDSEKNEDLFDTIANCPIPYESINEEGDSAFQREQLGKWNLGPGFEVAKEWSQEREADATPMVDNLSIFHLPVGVRPSEELKDCLEITFRSKKHEPDAGVEAVMEFTSSLLKAKHANSNKPKKHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLQDGNIYDGLWHSGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGTRYTETWEHGVLLDSKRLDR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0220 749 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
Tpr1g0220 749 Coils Coil 742 749 - -
Tpr1g0220 749 Gene3D - 669 716 - -
Tpr1g0220 749 Gene3D - 615 668 - -
Tpr1g0220 749 MobiDBLite consensus disorder prediction 417 437 - -
Tpr1g0220 749 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 614 740 - -
Tpr1g0220 749 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 7 749 - -
Tpr1g0220 749 SMART morn 615 636 IPR003409 -
Tpr1g0220 749 SMART morn 707 728 IPR003409 -
Tpr1g0220 749 SMART morn 661 682 IPR003409 -
Tpr1g0220 749 SMART morn 638 659 IPR003409 -
Tpr1g0220 749 Pfam MORN repeat 663 685 IPR003409 -
Tpr1g0220 749 Pfam MORN repeat 710 721 IPR003409 -
Tpr1g0220 749 Pfam MORN repeat 640 662 IPR003409 -
Tpr1g0220 749 Pfam MORN repeat 622 638 IPR003409 -
Tpr1g0220 749 Gene3D Tubulin/FtsZ, GTPase domain 120 368 IPR036525 -
Tpr1g0220 749 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 7 749 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0220 70 748 PP2C-type Phosphatase Gene Family AT1G75010 47.681 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0220 - - gsj:114371951 1083.17