Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0199 ATGTTATCGGAGTTAGTGAACTTTTTGAAGGCCTGCTTTCGGCCGAGTACTGATGGGTATGCACGAACAGCATCAGATGCCGGAGGTAAACAGGATGGACTATTGTGGTACAAAGACTTGGGGCAGCACTTGTGCGGTGAATTTTCGATGGCTGTAGTTCAAGCCAATAACTTGCTGGAGGATCAGAGTCAGATTGAATCTGGTAGTTTGAGCTTGACCGAGTCTGGCCCTTGTGGAACATTTGTTGGTATCTATGATGGACATGGAGGGCCTGAGACATCACGGTTTATCAACAATCATCTATTTCAACATCTCAAGAGATTTACTTCCGAGCAACAATCAATGTCAGTGGATGTAATTCGCAAGGCAATCCAAGCAACAGAAGAGGGGTTTATGTCGCTGGTTTCACAACTGTGGTCAATTTCACCACAAATTGCAGCAGTTGGATCGTGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAACCTCGGTGATTCTAGGGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGTGAGGTTTTAGCCATGCAATTATCAACGGAGCACAATGCATCAATAGAGTCCGTAAGACAGGAGCTTCATTCTATGCACCCCGATGATTCAAATATCGTTGTTTTGAAGCATAACGTATGGCGTGTGAAGGGGATTATACAAATTTCTAGATGTATTGGTGATGTGTATTTGAAAAAAGCTGAATTCAACAGAGAACCATTATATGCCAAGTTTCGACTTAACGAGCCTTTCAAGAAGCCAATACTGAGCTCAGAACCATCAATATTAGTGCACCCATTGCAACCTCATGATCAATTCATTATATTCGCATCTGATGGGCTCTGGGAGCACTTCAGCAATCAAGAAGCAGTTGATATAGTTCAAAAGAATCCTCGCGCTGGAATTGCAAGGAGGATGGTGAAAACTGCGCTTAAAGCAGCGGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAACAAAATTGATCGTGGAGTTCGGCGGCATTTCCATGATGATATAACTGTGATTGTTGTGTATCTCGATTCAAATCTGATGAGTAGGGCAAGCACCGTGAAGTTCCCTAGTATTTCTGTTAGAGGTGGTGGTGTTAACATTCCTCAAAACACATTGGCACCTTGTACTACTACAACAAATAATGGTGGTACTTAA 1194 0.4238 MLSELVNFLKACFRPSTDGYARTASDAGGKQDGLLWYKDLGQHLCGEFSMAVVQANNLLEDQSQIESGSLSLTESGPCGTFVGIYDGHGGPETSRFINNHLFQHLKRFTSEQQSMSVDVIRKAIQATEEGFMSLVSQLWSISPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRVVKATGEVLAMQLSTEHNASIESVRQELHSMHPDDSNIVVLKHNVWRVKGIIQISRCIGDVYLKKAEFNREPLYAKFRLNEPFKKPILSSEPSILVHPLQPHDQFIIFASDGLWEHFSNQEAVDIVQKNPRAGIARRMVKTALKAAAKKREMRYSDLNKIDRGVRRHFHDDITVIVVYLDSNLMSRASTVKFPSISVRGGGVNIPQNTLAPCTTTTNNGGT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0199 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Tpr1g0199 397 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Tpr1g0199 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Tpr1g0199 397 SMART PP2C_4 41 353 IPR001932 -
Tpr1g0199 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Tpr1g0199 397 CDD PP2Cc 48 355 IPR001932 -
Tpr1g0199 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Tpr1g0199 397 Gene3D - 37 365 IPR036457 -
Tpr1g0199 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0199 Tpr-Chr1 1626383 1629741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0199 1 392 PP2C-type Phosphatase Gene Family AT4G38520 73.469 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0199 - K01102 gmx:100790374 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0199 1 1626383 1629741 Tpr1g0199 1 1626383 1629741 ECH