Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0181 ATGGTGACGGTGGCGATGGAAGACAACGAAACCTGCGGCAGCGGAGTTCACCACCGCACGTCTTCTTCTTCATCAATTCCTGGACAAACTCGTCATCACCGCCAGAAACTCGAAGTATACAATGAAATTCTCCGTCGTCTTAACGATTCCGGCAACGAAGAAGCTATGCAACCTGGCTTCAGCGATCAGCTTTGGGCTCACTTCAACCGTCTTCCTTCACGGTATGCGTTAGATGTGAATGTGGAAAGGGCAGAAGATGTTCTTATGCATAAGAGATTACTACATTTAGCACATGATCCTGCTAATAGACCTCAAATTGAAATTCGCTTAGTTCAGCTTCATTCCTCATCAGATGAGAACACACCCGACACTTTCCAATCATATGCTCCTGGCGAGGATTCTGTTCAAAGCTCTTTGAAGTACTCAAGCAGACAGGGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAAATGATTCCAATGACTTAGAAGAGGAGCGATCTTTGCATGACAGTAGGCCCATGCATGAAATCACCTTCTCAACAGATGACAAGCCAAAGCTTCTCAGCCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTGAACATCCAAGAAGCACATGCTTTTTCCACAAATGATGGTTACTCTTTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTAAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACTTGAGAGGTCCAGTCATCAATCAATATCATCTGTTGATGAGCGAGATCAAGCAAGGATGAAAAATGGACTGGATCATTTGACAATTCCAAACGATGGGACAGATGTTTGGGAAATAGATCCAAAACATTTGAAATATGGAACTCAAATTGCAGCTGCGTCATACGGTGAACTATTTAAAGGTACATATTGTAGTCAGGAAGTAGCCATCAAAGTTCTTAAGGCTGAGCATGTAAGTTCAGAAATGCAGAAAGAGTTTGCTCAGGAAGTCTACATCATGAGAAAGGTTCGACACAAGAATGTTGTGCAATTCATGGGAGCATGTACCAAGCCCCCACGCTTATGCATAGTTACAGAGTTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAAGGGTTTTTCAAATTTCCTACCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATAACATAATCCATAGAGACTTGAAGACTGCCAATCTTTTGATGGATGAAAATGGTGTTGTAAAGGTCGCCGATTTTGGGGTTGCTAGAGTGAAAACTCAGTCCGGAGTTATGACAGCAGAAACTGGGACATATCGTTGGATGGCTCCTGAGGTTATAGAACACAAGCCATATGATCACAAGGCAGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGGAAGCTTCCATACGAATATTTGACCCCTCTACAGGCAGCAATAGGAGTGGTTCAGAAGGGTTTACGGCCCACCATCCCCAAGGGCACCAACACAAAGTTTGTTCAAATTCTTGAGACGTCTTGGCAGCAAGATCCAACTTTAAGACCCGATTTCTCTGAAATCATCGAGATCCTGCAGCAGTTGGCTAAGGAGGTTGGAGATGAAGGAGAGGGGCGCAAGGACAAATCCGGAGGATTCCTGTCTGTCCTCAGACGAGGTCATCACTAA 1737 0.4358 MVTVAMEDNETCGSGVHHRTSSSSSIPGQTRHHRQKLEVYNEILRRLNDSGNEEAMQPGFSDQLWAHFNRLPSRYALDVNVERAEDVLMHKRLLHLAHDPANRPQIEIRLVQLHSSSDENTPDTFQSYAPGEDSVQSSLKYSSRQGIHPPPAFGSSPNLEALALEENDSNDLEEERSLHDSRPMHEITFSTDDKPKLLSQLTALLAEVGLNIQEAHAFSTNDGYSLDVFVVEGWPYEETEKLKETLEKEVLKIERLERSSHQSISSVDERDQARMKNGLDHLTIPNDGTDVWEIDPKHLKYGTQIAAASYGELFKGTYCSQEVAIKVLKAEHVSSEMQKEFAQEVYIMRKVRHKNVVQFMGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKTANLLMDENGVVKVADFGVARVKTQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKGTNTKFVQILETSWQQDPTLRPDFSEIIEILQQLAKEVGDEGEGRKDKSGGFLSVLRRGHH* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0181 578 Gene3D - 183 257 - -
Tpr1g0181 578 MobiDBLite consensus disorder prediction 15 30 - -
Tpr1g0181 578 Coils Coil 236 259 - -
Tpr1g0181 578 Pfam Protein tyrosine and serine/threonine kinase 300 548 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 Gene3D Transferase(Phosphotransferase) domain 1 378 566 - -
Tpr1g0181 578 ProSiteProfiles ACT domain profile. 186 261 IPR002912 -
Tpr1g0181 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Tpr1g0181 578 MobiDBLite consensus disorder prediction 556 571 - -
Tpr1g0181 578 CDD STKc_MAP3K-like 305 548 - -
Tpr1g0181 578 ProSiteProfiles Protein kinase domain profile. 299 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0181 578 SUPERFAMILY ACT-like 184 248 IPR045865 -
Tpr1g0181 578 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 23 566 - -
Tpr1g0181 578 CDD ACT_TyrKc 184 251 - -
Tpr1g0181 578 SMART serkin_6 299 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0181 578 PRINTS Tyrosine kinase catalytic domain signature 373 386 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 PRINTS Tyrosine kinase catalytic domain signature 410 428 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 PRINTS Tyrosine kinase catalytic domain signature 456 466 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 PRINTS Tyrosine kinase catalytic domain signature 475 497 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 PRINTS Tyrosine kinase catalytic domain signature 519 541 IPR001245 GO:0004672|GO:0006468
Tpr1g0181 578 SUPERFAMILY Protein kinase-like (PK-like) 286 548 IPR011009 -
Tpr1g0181 578 MobiDBLite consensus disorder prediction 556 578 - -
Tpr1g0181 578 Gene3D Phosphorylase Kinase; domain 1 289 377 - -
Tpr1g0181 578 MobiDBLite consensus disorder prediction 117 144 - -
Tpr1g0181 578 MobiDBLite consensus disorder prediction 117 157 - -
Tpr1g0181 578 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 23 566 - -
Tpr1g0181 578 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0181 Tpr-Chr1 1441786 1449144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0181 2 577 MAP Kinase Kinase Kinase AT4G35780 63.558 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tpr1g0181 PK_Tyr_Ser-Thr 8.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0181 - - gmx:100805180 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0181 1 1441786 1449144 Tpr1g0181 1 1441786 1449144 ECH