Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0174 ATGGCGGGGGAAGAGAACGACGACGTCACATATACAGTCAAAATCACAGTCACACTCACAATTCCTCCACCAGAAACACAACCTACTACTGTGGATGCTAACGCCGAAACAGTGCCGTCGAATGGTGATGAAGTGGCACGAGCTATGGATGCTGTTGGTGAAACGGTATCGTTGAACGACGGCGAAGGTTCAATTAATGGCAATGCCGATGGCGTAGTAGCAGCTGAAAAATCCCTTTTTGATCGAGAAAAACAAGCTACATTGTTGTTGACGGACGATGAAGTAGCAGTCGGAGTTACTTCTGCTGCTCCGGCGACGGTTATGCGCGACAGAAGTAAAAAGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAAAAGATGAAAGAAGAGGCAGCGTTAAGGAAGATGGTAGAAGAAACTGATGGTGATGATGACGTGACAACCGGAGGCTCTGTTTCCGTTGAAGTTGCCACCGGCGTTAAAAATCGTTGTAGGAAGAGACAAACGATTTCTGGTAGTTCTGAAATTGATGGTTTTGTTGACGATCAGGACCGTTCTGAAATTGAAATGACTTTAGCTGATAAACCCAAATGCATTGAATCTCAGGTGCCAAAGTTCAACCGGAGAAATTCTAAGGGGATTGAAGAGGAGTCATCAATGTGCCATCAATGTAAGAGAAATGATAAGGGCAGGGTTGTCAGATGCACAAAATGCAACCGGAGAAGATTTTGCATACCTTGTTTAACTAAATGGTATCCTAAATTGAAAGAGAGTGATGTTGCCGAGGCGTGCCCTGTATGTAGTGATATATGCAATTGCATAGCATGCTTGCGATCTTCTAAACTCATCAATGAAATGAAGCATAGGGACAAGGATGAGGAGGTTGAGTTTACTAAGTATATGCTGAAAGGACTTCTTCCATATTTAACGCAGTTGGATGAAGAACAGATGATTGAGAAGGCAAAAGAAGCCAAGAGACAAGGGCTCTCATTCTCAAATATAAAAATAAAAGCGGCAGATTATTCTAAAGATGAGCGTTTGTACTGTGACAACTGCAAAACGTCGATATTTGACTACCACAGGAGTTGTACAAGATGTTCTTTTCACATTTGCCTCATGTGTTGCCACGAGCTTCGTAGTGGGCAACTTATAGGTGGTGCAGATCAAATTGAGCTCGAGTATATATTTCGAGGTCACAATTATCGACATGGTGGAACTGCGGAGGTTAGAAGAAATGCATCACAGGCGGAGGATGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGAGATGGTAGCATTCCCTGTCCAAAAACCAATAATGAATGTGATCATGGTTTCCTTGAATTGAGAAGGATACTTTCTCCAAATTGCATCTCTGAGTTAGTATGCAAAGCAGAAGAACTTGCAGAAACATTTAAGCTTCAAGATGCAAAGGAGACTGTTGATAATGGATGCTCCTGCTTGAAGCCTGTTAGGAACGCCGATGATATAAACAATAACACAAGGAAGGCAGCTTTTCGTCAAGATTCGAGTGACAATTTTTTATACTGTCCTAGAGCTGTAGATCTACATAATGAAGATTTAAGACATTTTCAGTGCCATTGGAGCAAAGGGGAGCCTATAATTGTCCGCAATGTACTTGAATGCACATCTGGTTTAAGCTGGGAACCACTTGTGATGCGGCGTGCATTCTGTCAGAGAGGCACTACCAAGCACAAATCACCTTTGGATGTGAAGGCAATTGATTGCTCAGATTGGTCTGAGTTTCTCGATGTTTTGCCAACTTGGGTTATGAAGAGATGCAAGTACAAGGGAGATATTAATATCCACCAATTCTTTACTGGGTACACAAATGGTCGCTTGGATCGGCATGGTTGGCCTCAGGTTTTGAAATTGAAAGATTGGCCTCCTTCTAAATTTTTTGAAGAAAGTTTGCCTCGTCATCTTGCCGAGTTCATATCTTCCTTGCCGTTTAAAGAATATACAAATCCTTTCAAAGGTGTTCTTAACCTTGCTGTGAAGTTGCCTGATGGTGTTCTAAAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGATCAAGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCGGATGCAGTAAATGTGTTGACTCATATTGCAAAAGTGGAATTGGACTCTGATAGCATTGAAGCCATTAAGAAACTGACACAAAAGCACCTCAAGCGAGACAAGAGGGAGCTACATCTACATGGTGATAATCAAGATGGAGAGACTAATGTTGGCGTGCTTGATAATTCATTGTCTTGCGGGGATTCTTTAGATGGTGCTCTCTGGGACATATTTCGGAGAGAGGATGTACCCAAATTGGAGGAATATTTGAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTACTCTCCTTTAAAGCAGGTTATTCACCCCGTCCATGATCAGACCTTTTATCTGACTCCGGAGCATAAGAGGAAACTTAAGGAGGAGTATGGAATTGAGTCGTGGACGTTTATTCAGAAGCTCGGAGATGCTGTTTTCATTCCTGCCGGTTGTCCTCACCAAGTCAGGAATCTGAAGTCATGCATCAAAGTCGGGTTTGATTTTGTCTCACCTGAAAACGTTGGTGAGTGTTTTCGCTTGACGGAGGAATTCCGTAAGCTTCCGATAAACCACAGGTCCGCCAAGGACAAGTTGGAGGTGAAGAAAATGACTATATATGCTATGCTTGATGTGGTTAAAAAATTGGAGGAAGCAAGGTCTGGAGAAACAAAGGATCCAGTGTAA 2817 0.4274 MAGEENDDVTYTVKITVTLTIPPPETQPTTVDANAETVPSNGDEVARAMDAVGETVSLNDGEGSINGNADGVVAAEKSLFDREKQATLLLTDDEVAVGVTSAAPATVMRDRSKKKRGRKSFAEIQKMKEEAALRKMVEETDGDDDVTTGGSVSVEVATGVKNRCRKRQTISGSSEIDGFVDDQDRSEIEMTLADKPKCIESQVPKFNRRNSKGIEEESSMCHQCKRNDKGRVVRCTKCNRRRFCIPCLTKWYPKLKESDVAEACPVCSDICNCIACLRSSKLINEMKHRDKDEEVEFTKYMLKGLLPYLTQLDEEQMIEKAKEAKRQGLSFSNIKIKAADYSKDERLYCDNCKTSIFDYHRSCTRCSFHICLMCCHELRSGQLIGGADQIELEYIFRGHNYRHGGTAEVRRNASQAEDESTTREWSRSGWHANGDGSIPCPKTNNECDHGFLELRRILSPNCISELVCKAEELAETFKLQDAKETVDNGCSCLKPVRNADDINNNTRKAAFRQDSSDNFLYCPRAVDLHNEDLRHFQCHWSKGEPIIVRNVLECTSGLSWEPLVMRRAFCQRGTTKHKSPLDVKAIDCSDWSEFLDVLPTWVMKRCKYKGDINIHQFFTGYTNGRLDRHGWPQVLKLKDWPPSKFFEESLPRHLAEFISSLPFKEYTNPFKGVLNLAVKLPDGVLKPDMGPKTYIAYGFDQELGRGDSVTKLHCDMSDAVNVLTHIAKVELDSDSIEAIKKLTQKHLKRDKRELHLHGDNQDGETNVGVLDNSLSCGDSLDGALWDIFRREDVPKLEEYLKKHFREFRHVHYSPLKQVIHPVHDQTFYLTPEHKRKLKEEYGIESWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVGFDFVSPENVGECFRLTEEFRKLPINHRSAKDKLEVKKMTIYAMLDVVKKLEEARSGETKDPV* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0174 938 MobiDBLite consensus disorder prediction 407 425 - -
Tpr1g0174 938 Gene3D Cupin 520 905 - -
Tpr1g0174 938 ProSiteProfiles JmjC domain profile. 669 896 IPR003347 -
Tpr1g0174 938 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 111 928 IPR045109 GO:0032454|GO:0033169
Tpr1g0174 938 ProSiteProfiles Zinc finger RING-type profile. 221 268 IPR001841 -
Tpr1g0174 938 SUPERFAMILY Clavaminate synthase-like 531 914 - -
Tpr1g0174 938 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 216 282 IPR018866 -
Tpr1g0174 938 Pfam JmjC domain, hydroxylase 783 879 IPR003347 -
Tpr1g0174 938 MobiDBLite consensus disorder prediction 407 428 - -
Tpr1g0174 938 SMART cupin_9 650 896 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0174 Tpr-Chr1 1390578 1396570 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr1g0174 JmjC 1.8e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0174 K15601 - gmx:112997634 921.383