Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0173 ATGGCGGATGAAGAAAACAACGCAGTAACATACACAGTCAAAATCACAGTCACACTCACCATTCCTCCTCCAGAAACACAACCGAGTACTTTGGATGTTAATGCCGAAACGGTGCCATTCAAGGCTGATGAAGCGGCACAAGCCATGAATGTTGCCACCGAAATTATAGTGTTAAGCGACGACGATGATGATTCGGTTAAAGGTGATGACGTGGTAGCAATAGAGGAATCTGATACTGATCAAGGAAAACAAGATATAGATATTGGTGATAATAATGTGGCACAAACTATGGATGCTGTCACCGAAATGGCGTCGTTAAACAACGGCGATGATGTTGCTGATCGAGAAAAACAAGCTACGGCGTCATTGCCGGACGACGAACGTTCAGTTGAAGCTGACGACGTCGACGTGGCAGTCGGAAGCTCTTCGTTTGGAAAGAAACGCGGCAGAAAGAGAAAAACGGTGACGGAAGCTGAAATTCCTAAAACTGGAAATGAGGTTCAACAAGTTAACAAGAAACTGAAATGCATGGAACAGATTGTTCCTGAGTCGATTGAAGAGTCCAAGTCCACAATGTGCCATCAATGTCAGAGAAATGATAAGGGCAGGGTTGTCAGATGCACAAAATGCAAACGGAAAAGGTTTTGCATACCCTGTTTAACTAATTGGTATCCTAAATTGAAAGAGAGTGATGTTGCCGAGGCATGTCCTGTGTGCCGTGATAATTGCAATTGCAAAGCATGCTTGCGATCTTTTACACTCATCAATGAAATGAAGCATAGGGCTAAAAGTAAAACCAACAAGGATGAGGAGGTTGAGTTCTCTAAGTATTTGTTGAAAGGACTTCTTCCATATTTAAGGCAGTTGGATGAAGAACAGACGGTTGAGAAGGAAAGAGAAGCCAAGATACAGGGGCTCTCACTCTCAAAGCTAAAAATAAAATCGGCTGATTATCCTAAAGATGAGCGTGTGTACTGTGACAATTGTAAAACATCAATATATGACTATCACCGAACCTGTACAAAATGCTCTTTTGACCTTTGCCTCCTCTGTTGCTGCGAGCTTCGTGGTGGGCAACTTCTAGGTGGTGCAGATCCAATTGAGCTAGAGTATATTTTTCGAGGTCGTGATTATGTACATGGTGGAAATGAAGAAAAACAGGTGGAAGGAAATACATCACAGGATGAGGATGAGTCTACGACTCGTGAGTGGTCAAGATCTGGGTGGCATTCAAAAGGTGATGGTAACATTCCCTGTCCAAAACTCAACAATGAATGTGATCATGGTTACCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATATCTGAGTTAGTATGTAAAGCAGAAGAACTTGCAAAAACATTTAAGCTTCAAGATGCAGAGGAGACTCTTAATAATGGGTGTTCCTGCTTGAAGCCTGTTAGGAATGCCGATGATATAAACAATAACACAAGGAAAGCTGCTTTTCGTGAAGATTCCGTTGACAACTTTTTATATTGTCCTAGAACTTTAGATGTACATCATGAAGATTTAAGACATTTTCAGTACCATTGGAGCAAAGGGGAGCCTGTAATTGCCAGCAATGTACTTGAATGTTCATTTGGTTTAAGTTGGGAACCACTAGTCATGTGGCGTGCATTCCGTCAAATAACCAATTCCAAGCACGATGTACATTTGGATGTGAAGGCAGTTAATTGCTTAGATTGGTGTCAGGGAGATATTAATATCCACCAATTCTTTACTGGGTACATAAATGGTCGAAAGGATTGGCTTGATTGGCCTCAAGTGTTGAAATTAAAAGATTGGCCTCCTTCCGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATATCGTCCTTGCCTTATAAAGAATATACAGATCCTTTTAAAGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAATGCCAGACATGGGGCCAAGAACATATATTGCTTATGGATTTGCTCAGGAGTTTGGACGTGGTGATTCTGTGACTAAGCTCCATTGTGATGCGTCTGATGCAGTAAATGTGTTGACTCATATCGCTAAAGTGGAACTAAAACCTGAGCAAATTGCTGCTATCAAGAAATTGACACGTAGGCACCTTGAGCAAGATAAGAGGGAGCTACATGTTGATGGGAAGGTGGTTGAGATATTTCATCAACACTCTGGCACGAATGATGATGACCTGTCTTGTAGGCCAGAACTCAAAGAGGTTGAGAAAGTAACAGTGAAACAAGAAAACAGTTCATTTGCTGGAGAGGATTCCTTGGACGGTGCTCTCTGGGATATTTTTCGCAGAGAGGATGTACCCAAATTACAGGAATATATAAAGAAGCATTTCAGAGAGTTCAGACATATCCATTGCAGTCCTTTAAAGCAGATTATTCACCCAATTCATGATCAAACCATTTATCTGACTATGGAGCATAAGAAGAAACTTAAGGAGGAGTATGGAATTGAGCCTTGGACTTTTATTCAAAAGCTAGGAGATGCTGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAACATATTGGCGAGTGCTTCCGTTTGACAGAGGAATGTCGCAAGCTTCCGATAAATCACAAATCAGCTGAGGACAAATTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGGTTTGGGGAAACCAAGTCTCCTGTGTAA 2772 0.4138 MADEENNAVTYTVKITVTLTIPPPETQPSTLDVNAETVPFKADEAAQAMNVATEIIVLSDDDDDSVKGDDVVAIEESDTDQGKQDIDIGDNNVAQTMDAVTEMASLNNGDDVADREKQATASLPDDERSVEADDVDVAVGSSSFGKKRGRKRKTVTEAEIPKTGNEVQQVNKKLKCMEQIVPESIEESKSTMCHQCQRNDKGRVVRCTKCKRKRFCIPCLTNWYPKLKESDVAEACPVCRDNCNCKACLRSFTLINEMKHRAKSKTNKDEEVEFSKYLLKGLLPYLRQLDEEQTVEKEREAKIQGLSLSKLKIKSADYPKDERVYCDNCKTSIYDYHRTCTKCSFDLCLLCCCELRGGQLLGGADPIELEYIFRGRDYVHGGNEEKQVEGNTSQDEDESTTREWSRSGWHSKGDGNIPCPKLNNECDHGYLELRRILPPNCISELVCKAEELAKTFKLQDAEETLNNGCSCLKPVRNADDINNNTRKAAFREDSVDNFLYCPRTLDVHHEDLRHFQYHWSKGEPVIASNVLECSFGLSWEPLVMWRAFRQITNSKHDVHLDVKAVNCLDWCQGDINIHQFFTGYINGRKDWLDWPQVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTDPFKGSLNLAVKLPDYCVMPDMGPRTYIAYGFAQEFGRGDSVTKLHCDASDAVNVLTHIAKVELKPEQIAAIKKLTRRHLEQDKRELHVDGKVVEIFHQHSGTNDDDLSCRPELKEVEKVTVKQENSSFAGEDSLDGALWDIFRREDVPKLQEYIKKHFREFRHIHCSPLKQIIHPIHDQTIYLTMEHKKKLKEEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPEHIGECFRLTEECRKLPINHKSAEDKFEVKKIVIHAMLDVVEKLEKARFGETKSPV* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0173 923 MobiDBLite consensus disorder prediction 109 128 - -
Tpr1g0173 923 Pfam JmjC domain, hydroxylase 767 864 IPR003347 -
Tpr1g0173 923 MobiDBLite consensus disorder prediction 141 160 - -
Tpr1g0173 923 MobiDBLite consensus disorder prediction 106 136 - -
Tpr1g0173 923 ProSiteProfiles JmjC domain profile. 632 881 IPR003347 -
Tpr1g0173 923 ProSiteProfiles Zinc finger RING-type profile. 193 240 IPR001841 -
Tpr1g0173 923 SMART cupin_9 613 881 IPR003347 -
Tpr1g0173 923 Gene3D Cupin 499 890 - -
Tpr1g0173 923 SUPERFAMILY Clavaminate synthase-like 506 904 - -
Tpr1g0173 923 PANTHER - 68 907 - -
Tpr1g0173 923 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 68 907 IPR045109 GO:0032454|GO:0033169
Tpr1g0173 923 MobiDBLite consensus disorder prediction 383 409 - -
Tpr1g0173 923 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 187 252 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0173 Tpr-Chr1 1380448 1388947 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr1g0173 JmjC 7e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0173 K15601 - gmx:100780803 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0173 1 1380448 1388947 Tpr1g0173 1 1380448 1388947 ECH