Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0172 ATGGCGGGAGAAGAGAACGATGACGTCATATATACAGTCAAAATCACAGTCACACTCACCATTCCTCCTCCACAAACACAACCTACTACTGTGGATGTTAACCCGGAAACAGTGCCTTTCAAGGCTGATGAAGCGGCACAAGCCATGGATGTTCCCACCGAAATCGTAGTGTTAAGCGACGACGATGGTTCGGTTAAAGGTGATGATGACGTGATAGCAATAGAAGAATCTGATACTGATCGAGGAAAACAAGATATGGATATTGGCGCCGAAACGGCGTCGTTCAAGGACGATGAAGGTTCGGTTGAAGGTGATGACGTGGTAGACGGAGATTCTTCTTCTGTTAAACCTACTGTGACGCCAGCGATATACGGTAAAAAGAAACGCGGGAGAAAGAGTTTTGCAGAAATTGAGAGGATGAAGAAAACGGAGAAGCGTAGTAGAAAGAGAAAAACGGAGAAGGAGGAAGATGATTCTGGTGAAGGTGATGACGTGGCGGTGGTGGAAGATTCTGGTTCTGTTGATGTGAGAAAGAGTGGACGGCCGATGAAGACGGTATCGTTTAATGAGGATGAGTATTGGTTAGATTTGGATGAGGAAGTGAAGACTAAGGGAAAACGTGGTAGGAAGAAGAAGATTATTATTGCTGCTGAAGAAGAAGGGGAAAATGTGAAGAAAGTGGAGAAGAAGAAACCTGGTAGTAAAAAAAGAAAGACAATTGATGAAGCTGCACAAGAGGAGGAAAATGATGGTTTTGTTGAGAATGAGAAAGAAAATGAAATGGTCAGTGAAGAACAGACAGTGCCTAAATACATTGAACCGAAGGTGCCAAAATTAATCAATCGAACTAAGTGGATCGAAGAAGAGTCCTTAATGTGCCATCAATGTCAAAGAAATGATAGGGGCAGGGTTGTCAGATGCACAAAATGCAAAAGGAAAAGATATTGCGTACCCTGTTTAACTAATTGGTATCCTCAGTTAAAAGAGGATGAAATTGCTAAGGCATGTCCGGTGTGCCGTGATAATTGCAATTGCATAGCATGCTTGCGATCAACTAAACTTATCAAGGCAATTAAACGAAGCAATCCACAAACAAACATAGAGATAGATGATGAGGTTGAGCTCTCCAAGTATATGTTGAAAGAACTTCTTCCTTATGTAAGACAATTGGATGAAGAACAAATGGCCGAGAAGGAGATAGAAGCAAAGCGACAAGGGCTCTCACTTTCTGAGCTAAAAATAGAAGTAGCGGATTGCCCTAAAAATGAGCGGGTGTATTGTGACAACTGCAAAACGTCAATATTTGACTACCATAGAAGTTGTACAAAATGCCCTTTTGACATTTGTCTCTCCTGTTGCTGCGAGCTTCGTGGCGGGAAGCTCCTAGGTGGTGCAGATCCAATTGAGTTTGAGTTTAGCTTCCGAGGGCGTGATTATCTGCATGGTGGAAAAGAAGAGAAAATAAAAAAAGATGAACCTTGTGATGCTGCCCAGCCTGAGATTCGTGAATGGTCAAGATCGGGATGGCATGCATATAGCGATGGTAGTATTCCCTGTCCAAAAGCCAATAATGATTGTCATCATGGTTTCCTTGAACTGAGAAGCATACTTGGACCAAATTTCATCTCTAAGTTAGTATGTAAAGCAAAAGAACTTGAAGAGACACTTAATCTACAAGATGCACAAGAGACTCTTGATAGTAGGTGTTCTTGTTTGAAGCCTGTTAAGAATGCAGATGATATACACAATAACAGAAGAAAGGCAGCTTCTCGTGAAGATTCCAGTGACAACTTCTTATACTGTCCTAGAGCTGTAGATCTACACAAAGAGGATTTTAAACATTTTCAATGGCATTGGGGCAAAGGGGAACCAGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTCTAAGTTGGGAACCACTTGTCATGCGGCGCGCATTCCGTCAGATAAGCAATAGCAAACACAAATCACTTTTGGATGTGAAGGCAATTGATTGTTTAGGTTGGTGCGAGGCAGAAATTAATGTGCACCAATTCTTTACTGGGTACACAAAAGGTCGCTTGGATTGGCTTAAATGGCCACAGGTATTAAAATTAAATGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTATAAAGAATATACAAATCCTTTCAACGGTGTTCTTAACCTTGCTGTGAAGTTGCCTGAGGGTGTTCTAAAGCCAGACATGGGCCCAAAAACGTATATTGCCTATGGATTTGATCAGGAGCTTGGGCGGGGTGATTCTGTAACTAAGCTCCATTGTGATATGTCCGATGCAGTAAATGTGTTGACTCATATTTCTAAAGTGGAATTGGAATCTGTGGGCATTAAAGCCATTAAGAAACTGACACAAACACACCTCGATCAAGACAAGAGAGAGCTACATCTTCATTGTGATAATCAGGATGGAGAGACCAATGATGGTGTGCTTGATAAGTCATCGTCTTCCATAAATGCTGATGATGGCCTTTCTTCTGAAGTACAGCCCAAAGAGGGCGATGAAGTGACCGTGAATAAAGAAAATAGGTTTTTGGTAGGGGGGGATTCTTTAGATGGTGCTCTCTGGGATATATTTCGGAGAGAGGATGTACCTGAATTAGAAGAATATCTAAAGAAGCATTTCAGAGAGTTCAGGCATGTACATTGCTCTCCTTTAAAGCAGGTTATTCGCCCCATCCATGATCAGACCTTTTATCTGACTCTGGAGCATAAGAGGAAACTTAAGGAGGAGTATGGAATCGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTCATTCCTGCCGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTCGGGCTTGGTTTTGTCTCACCTGAAAATGTTGGTGAGTGTTTCCGTTTGACAGAAGAATGCCGTAAGCTTCCGATAAACCACTTGTCCGCCGAGGACAAGTTGGAGGTGAAGAAAATGACTGTATATGCTATGCTTGATGTGGTTAAAAAATTGGAGGAGGCAAGGTCCGAAGAAAAGAATCAATGA 3090 0.4204 MAGEENDDVIYTVKITVTLTIPPPQTQPTTVDVNPETVPFKADEAAQAMDVPTEIVVLSDDDGSVKGDDDVIAIEESDTDRGKQDMDIGAETASFKDDEGSVEGDDVVDGDSSSVKPTVTPAIYGKKKRGRKSFAEIERMKKTEKRSRKRKTEKEEDDSGEGDDVAVVEDSGSVDVRKSGRPMKTVSFNEDEYWLDLDEEVKTKGKRGRKKKIIIAAEEEGENVKKVEKKKPGSKKRKTIDEAAQEEENDGFVENEKENEMVSEEQTVPKYIEPKVPKLINRTKWIEEESLMCHQCQRNDRGRVVRCTKCKRKRYCVPCLTNWYPQLKEDEIAKACPVCRDNCNCIACLRSTKLIKAIKRSNPQTNIEIDDEVELSKYMLKELLPYVRQLDEEQMAEKEIEAKRQGLSLSELKIEVADCPKNERVYCDNCKTSIFDYHRSCTKCPFDICLSCCCELRGGKLLGGADPIEFEFSFRGRDYLHGGKEEKIKKDEPCDAAQPEIREWSRSGWHAYSDGSIPCPKANNDCHHGFLELRSILGPNFISKLVCKAKELEETLNLQDAQETLDSRCSCLKPVKNADDIHNNRRKAASREDSSDNFLYCPRAVDLHKEDFKHFQWHWGKGEPVIVSNVLECTSGLSWEPLVMRRAFRQISNSKHKSLLDVKAIDCLGWCEAEINVHQFFTGYTKGRLDWLKWPQVLKLNDWPPSNLFEESLPRHCAEFISSLPYKEYTNPFNGVLNLAVKLPEGVLKPDMGPKTYIAYGFDQELGRGDSVTKLHCDMSDAVNVLTHISKVELESVGIKAIKKLTQTHLDQDKRELHLHCDNQDGETNDGVLDKSSSSINADDGLSSEVQPKEGDEVTVNKENRFLVGGDSLDGALWDIFRREDVPELEEYLKKHFREFRHVHCSPLKQVIRPIHDQTFYLTLEHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVGLGFVSPENVGECFRLTEECRKLPINHLSAEDKLEVKKMTVYAMLDVVKKLEEARSEEKNQ* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0172 1029 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 288 354 IPR018866 -
Tpr1g0172 1029 MobiDBLite consensus disorder prediction 226 245 - -
Tpr1g0172 1029 MobiDBLite consensus disorder prediction 72 101 - -
Tpr1g0172 1029 CDD cupin_RmlC-like 892 961 - -
Tpr1g0172 1029 ProSiteProfiles JmjC domain profile. 732 989 IPR003347 -
Tpr1g0172 1029 ProSiteProfiles Zinc finger RING-type profile. 293 340 IPR001841 -
Tpr1g0172 1029 SMART cupin_9 713 989 IPR003347 -
Tpr1g0172 1029 MobiDBLite consensus disorder prediction 72 178 - -
Tpr1g0172 1029 Gene3D Cupin 599 997 - -
Tpr1g0172 1029 Coils Coil 542 562 - -
Tpr1g0172 1029 MobiDBLite consensus disorder prediction 226 251 - -
Tpr1g0172 1029 MobiDBLite consensus disorder prediction 129 157 - -
Tpr1g0172 1029 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 118 1021 IPR045109 GO:0032454|GO:0033169
Tpr1g0172 1029 Pfam JmjC domain, hydroxylase 878 968 IPR003347 -
Tpr1g0172 1029 SUPERFAMILY Clavaminate synthase-like 611 1007 - -
Tpr1g0172 1029 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0172 Tpr-Chr1 1362575 1371541 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr1g0172 JmjC 4.8e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0172 K15601 - gmx:100780803 1080.09