Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0169 ATGAAGTTAATGCACTGCCATGAACTGTGCAAGCCAGTTACTATCTTGATTCTAGTTAACTTAGCTCTTGCTTTTGTCAATTTACTTCTTAAAATGGTTCTCAATGAAGGAATGGACTACATGTCCATTGTAACATATCGACAAGCTATTTCATTTATCTTCATGGCACCTATTGCATGGTTCTATGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTTCTCTCTGCTCTTGTTGGAGTAACAATCCCTCAATACTTGTTTCTTCTTGGACTTCAGTATACATCTGCCACATTCTCATGTGCATTCCTCAACATGGTGCCTGTATTTACATTCATAATGTCACTTCCATTTGGGATAGAGAAGGTCAACATGAAAAGCAAGAGTGGTAAAGCCAAAATCTTGGGAACTATTGTGTGCATTGGTGGAGTTTTGATATTAGCCCTTTATAAAGGAATTTCCATTAACAGCTCACAATCTCAACACATAGCCAATACATATACAAGTGCACCTCCCAAGTTAGGGAAATGGATTATAGGTTCAATACTTTTGACTGCAGGTTGCATCATGTGGTCTTCTTGGTTTGTTATACAAGCTAAGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCTATTCAATCAGCAATATTAACTTTGGTTATCAAGAGAAACAATGCATCATGGATCCTCAAAGGAAAGCTAGAAATATTGTGTGTAATATATGCTGGAATGGTGGGGTCAGGCCTGTGTTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTTTACAAATATTTGTGGCTGTGCTTGATTTCACTATACTAAAGGAGGAAATATACTTAGGAAGTATTGCAGGATCTGTGTTGGTTATTGTTGGAATGTATGTTCTTTTATTGGGAAAAAGCATGGAGGAAGAGCAATGTGTCATAAAGGATACACAAGCAAATCAAGATGTGGAATGTCAATGA 1035 0.3729 MKLMHCHELCKPVTILILVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFIFMAPIAWFYERKHKLEAHIICLLFLSALVGVTIPQYLFLLGLQYTSATFSCAFLNMVPVFTFIMSLPFGIEKVNMKSKSGKAKILGTIVCIGGVLILALYKGISINSSQSQHIANTYTSAPPKLGKWIIGSILLTAGCIMWSSWFVIQAKISKKYPCQYSSTAILSLFAAIQSAILTLVIKRNNASWILKGKLEILCVIYAGMVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIFVAVLDFTILKEEIYLGSIAGSVLVIVGMYVLLLGKSMEEEQCVIKDTQANQDVECQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0169 344 PANTHER WAT1-RELATED PROTEIN 10 342 IPR030184 GO:0016021|GO:0022857
Tpr1g0169 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Tpr1g0169 344 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020|GO:0016021
Tpr1g0169 344 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Tpr1g0169 344 PANTHER WAT1-RELATED PROTEIN 10 342 - -
Tpr1g0169 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0169 Tpr-Chr1 1343643 1345714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0169 8 254 Nodulin-like Gene Family AT3G30340 46.215 2.47e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0169 - - gmx:100802053 563.918