Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0158 ATGTCTAACACCGACGGAACAACCACTACAACCACAACTAACGGCTCAATCATTGACCAAAACCGTCAACACTTAGCCGTTAAAAAACCCCCTTCAAAAGACCGTCACAGTAAAGTTGACGGCCGTGGACGCCGTATTCGTATGCCAATCATATGCGCTGCTCGCGTCTTCCAGCTAACTCGCGAATTAGGTCACAAATCCGATGGTCAAACAATCGAATGGCTCCTCCGTCAAGCTGAACCTTCAATCATCGCCGCTACCGGTACCGGAACTACTCCGGCGAGTTTCTCATCTCTCTCTGTTTCACTTCGTGGCTCTAATAATTCACTTCCGTCTCCTTCTTCAACTTCGTTAGAACATAAACCTCTTCTCTCTCCGTCACCGTTCATTCTCGGTAAACGTATTCGTACGGACGATGATTCTTCATCTTCTTCTGCTCATGCTAAAGAAGACGCTCTTTCTGTTGCTTCTCTTTCAACACCTGCAGCGCTTTGGGCGTTACCTTCGCGGCCTGATTTTGGACAAATTTGGAGTTTCGCTGCCGCTGCTGCTGGTGCTCCTCAGCCGGAAATGGTGATTCAGTCTTTGTCTCAACAGCAGCAGCAACAACATCAAGCTTCTTTCTTCTCTCATCATCATCATCAACAGCAACAAGCTATGGGTGAAGCTTCAGCTGCTAGAGTTGGGAATTATCTTCCTGGTCATCTGAATTTGCTTGCTTCATTGTCTGGTGGACATGGAAATTCTGGTCGGGGAGACGACGAGCATCATTGA 774 0.4767 MSNTDGTTTTTTTNGSIIDQNRQHLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSVSLRGSNNSLPSPSSTSLEHKPLLSPSPFILGKRIRTDDDSSSSSAHAKEDALSVASLSTPAALWALPSRPDFGQIWSFAAAAAGAPQPEMVIQSLSQQQQQQHQASFFSHHHHQQQQAMGEASAARVGNYLPGHLNLLASLSGGHGNSGRGDDEHH* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0158 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 253 IPR005333 GO:0003700
Tpr1g0158 257 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g0158 257 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Tpr1g0158 257 MobiDBLite consensus disorder prediction 26 44 - -
Tpr1g0158 257 MobiDBLite consensus disorder prediction 101 123 - -
Tpr1g0158 257 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 253 - -
Tpr1g0158 257 MobiDBLite consensus disorder prediction 1 44 - -
Tpr1g0158 257 Pfam TCP family transcription factor 32 178 IPR017887 -
Tpr1g0158 257 MobiDBLite consensus disorder prediction 101 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0158 Tpr-Chr1 1276325 1278418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0158 12 255 TCP Transcription Factor Family AT5G23280 65.200 1.25e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr1g0158 TCP 4.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0158 K16221 - gmx:100799005 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0158 1 1276325 1278418 Tpr1g0158 1 1276325 1278418 ECH