Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0137 ATGGTAGATGTGAAACTATTAGGATTTTGGTCTAGCCCTTTTGTTCATAGAGTGATATGGGCTCTAAAATTCAAAGGCATAACCTATGATTATATAGAACAAGATAGACATACCAAAAGTGAATTACTCCTTCAATCTAATCCTGTTTACAAGAAAGTCCCTGTTCTTATTCACCAAGGTAAAGCCATTGCAGAATCTCTTGTTATTCTTGAATACATTGAAGAAACTTGGCCACAGAATCCATTGCTGCCACAAGATTGCTATCAGAGAGCCTTGGCTCGATTTTGGATTAAATTTGGAGAAGATTCGATTGCTTCTATAACGGATTTGTTTCTCCGACCCCCTAAAGACGAAAAAGAAAGAGGTAATGCAATAGAAAAAGCACAAGAAACTATCACAATAATGGAAGAGCAAGGGCTAGGGGACAAGAAGTTTTTTGGAGGCATCAATATTGGAATGGTGGACATAACATATGGATGCCTTAGTCATTGGTTAGAAGGGTTGGAGGAAATTGTTGGGATCAAATTGATTGAGGCAAATAAATTTCCTCGGTTGCATGCATGGATTCAAAACTTTAAACAAGTTCCTTTGATTAAAGAAAACATTCCTGATTATCAGAAACTATTGCTCCATCTTCAATGGCGCAGGCAGGAATATATTATATAG 666 0.3694 MVDVKLLGFWSSPFVHRVIWALKFKGITYDYIEQDRHTKSELLLQSNPVYKKVPVLIHQGKAIAESLVILEYIEETWPQNPLLPQDCYQRALARFWIKFGEDSIASITDLFLRPPKDEKERGNAIEKAQETITIMEEQGLGDKKFFGGINIGMVDITYGCLSHWLEGLEEIVGIKLIEANKFPRLHAWIQNFKQVPLIKENIPDYQKLLLHLQWRRQEYII* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0137 221 CDD GST_N_Tau 4 77 - -
Tpr1g0137 221 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Tpr1g0137 221 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Tpr1g0137 221 Gene3D Glutaredoxin 2 82 - -
Tpr1g0137 221 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Tpr1g0137 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Tpr1g0137 221 SFLD Main (cytGST) 3 219 - -
Tpr1g0137 221 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 216 - -
Tpr1g0137 221 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Tpr1g0137 221 SFLD Main.3: Omega- and Tau-like 3 219 IPR045073 -
Tpr1g0137 221 Gene3D - 83 220 - -
Tpr1g0137 221 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Tpr1g0137 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tpr1g0137 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 220 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0137 Tpr-Chr1 1126872 1127835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0137 3 213 Glutathione S-transferase Gene Family AT2G29460 46.759 1.21e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0137 K00799 - gmx:547586 379.407