Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0136 ATGGAGAGGCAGAACAACCAAACTCACAATAACAGAAGGGCAAGATGGGTACTACCAACTAGACAACATGATTGCCATGAGATGGAATATTTCAATAGTTACAATAATGTTGACATCCACCAAAATTTAATCAAGGATAACGTGTGGATTAAGGCCTATAAAACTGCTATTGAACATCATCAGCAACAAATTGCTGGAAAGATTGTTTTAGATGTTGGATGTGGAATAGGTCTATTATCTATATTATGTGCTCAAGCTGGAGCAAGTAAGGTATATGCCATTGACGCAAGTAACATTGCTCGGGAGGCGAAACATGTTGTTAAAGCAAACAATCTTTCTGACATCATCACAGTATTGCATGGACGAGTTGAGGTACACTACTCTGCCCTCCCCAATATGTTTTACATTTAA 411 0.382 MERQNNQTHNNRRARWVLPTRQHDCHEMEYFNSYNNVDIHQNLIKDNVWIKAYKTAIEHHQQQIAGKIVLDVGCGIGLLSILCAQAGASKVYAIDASNIAREAKHVVKANNLSDIITVLHGRVEVHYSALPNMFYI* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0136 136 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 124 IPR029063 -
Tpr1g0136 136 Pfam Ribosomal protein L11 methyltransferase (PrmA) 63 119 - -
Tpr1g0136 136 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 124 IPR025799 GO:0016274|GO:0018216
Tpr1g0136 136 Gene3D Vaccinia Virus protein VP39 7 134 IPR029063 -
Tpr1g0136 136 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 19 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0136 Tpr-Chr1 1122734 1125424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0136 30 124 C2H2 Transcription Factor Family AT3G12270 37.255 4.12e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0136 K11437 - sspl:121758188 134.806