Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0127 ATGAAAGAGATGTTAGGTTCAGCTTCAACATCAACAACAATCAATTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGGACTGGTCTTGGGATCTATGAGCAGGGTAGATTAGAACCGTTGGAAACTCGTGTGAAGAATAATAAACGAGGTTTGGGAGCTGATATAGTGAAGAAAAAGGTTGTTAAGCCTGATCATGGTGATTCCTCCAAAGCAGACAATAAGCAGGAACAAAAGAAAACCAAAGCACTTCCTAAACGGGTGAGAAAGATGCAGGAGCTTGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGAAAATGTGTGA 366 0.4126 MKEMLGSASTSTTINSSNIGFQLLKKHGWKEGTGLGIYEQGRLEPLETRVKNNKRGLGADIVKKKVVKPDHGDSSKADNKQEQKKTKALPKRVRKMQELEKKMQEKEFERAFFREFWPENV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0127 121 MobiDBLite consensus disorder prediction 61 92 - -
Tpr1g0127 121 PANTHER BAT4 PROTEIN-RELATED 3 121 IPR039146 -
Tpr1g0127 121 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Tpr1g0127 121 SMART G-patch_5 14 60 IPR000467 GO:0003676
Tpr1g0127 121 Pfam G-patch domain 17 59 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0127 Tpr-Chr1 1061393 1064906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0127 3 58 C2H2 Transcription Factor Family AT5G26610 48.214 1.57e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0127 - - cam:101497292 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0127 1 1061393 1064906 Tpr1g0127 1 1061393 1064906 ECH