Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0111 ATGATGGGTTCGAGGGGACTTTTCGGCTGGTCTCCACCTCATATTCAACCTCTGACGCCGGTGTCGGAGGTTTCAGAGCCGCCGGAGTCTCCTTCACCGTATATGGACCTCGGTGCAGAGACGTCTGCGTCACAGCAAATGGAGGCGGAGGAAGAGATGGAAGAGATGGAGGATATTGAGCCGCCGCCAGCTTCTGTTCCTTTTTCTCAACTCTTTGCTTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGTTCTGTCGCCGCCGCTGCTCATGGTACTGCTCTTGTTGTTTATTTGCACTACTTTGCTAAAGTTATTCAGGTTCCTCAATATCCACAGAAAGATCAGTTTCATAGGTTCAAGGAGCTTGCTTTGACCATTGTTTATATTGCTGGTGGTGTTTTTGTTGCTGGTTGGATTGGTAAGTTAATCATGAAGAATGAGTTTTTACTACTTGTTGAATCTAAGTTTCCCGCAGTACTGATTTTTCTTTCTTGTTTAATAGAGGTTTCATGTTGGATTCTTACCGGAGAACGGCAGACAGCTGTCATCAGATCAAAATATGTTAGAGTATTACTTAACCAAGATATGAGTTTCTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTGTTGAGTGATGTACTGCTCATTCAGTCTGCTCTCAGTGAAAAAGTTGGGAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCCGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATACGGACCTTGTCTGCATTTACAAATGAAACATTGGCTAAATATTCATATGCAACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTCCAAGGGCTTGGCCTTGGATTTACATATGGACTCGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATACATGGAAAAGCTCACGGTGGGGAAATTATAACAGCTCTGTTTGCTGTGATTTTAAGCGGCTTGGGATTAAACCAAGCAGCGACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTATTTGAGATGATAAGCCGGTCATCCTCATCTTTTGATCACGACGGAAGTGCTCCTGTGTCTGTACAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCACGCCCTGAAATCCCTATCTTAAGTGGTTTTTATCTCACGGTTCCTGCTAAGAAAACCGTGGCACTTGTTGGCAGAAATGGTTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGAAGGGATACCACAGCAGATCAAATTGAAGAGGCTGCTAAAATAGCTCACGCACATACCTTTATAAGTTCATTAGATAAAGGTTATGATACACAGATTGGCAGGGCTGGTTTAGCTTTGACAGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCCATTCTCCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCCCTGGATCTCCTTATGCTGGGGCGCTCGACAATAATTATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCAGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGAAGAATTATTGACCCTGGGTGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCTACAAAACTTCCAAAGAGGATGCCTGCTCGCAACTACAAGAAGACTGCAGCTTTTCAAATTGAGAAAGATTCTTCAGAGAGTCATAGCTGCAAAGAACCATCATCCCCTAGAATGATGAAGTCACCCTCTCTTCAAAGAATTTCTGCTGTATTTCGGCCTTCAGATGGCTTCTTTAACTTACAAGATTCACCACAAGTGCAGAGCCCACCGCCTGAGAAGATGATGGAGAATGGTCAGTCTTTGGATTCTACAGAGAAAGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGGCTACCCGAGTTACCTAAGATTGATGTTCAGTCAGTGCATCGACAAACATCAAATGGTTCTGATCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAAACATTTAGCAGACCAGATAGTTATTCTGATGAATTTTCAGTGAAAATGAACGAAACAAAGGATGCACGGCATCGGGATCAACCTTCATTTTGGAGACTGGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGTGCGTTCAATCCCCTTCTAGCTTATGTTATTGGCCTGGTGGTGACAACTTACTATAGAATCGATGCAACTCATCACTTGCGGGGGGAGATAGACAAGTGGTGCTTACTCATTGCCTGCATGGGTATTGTGACAGTAGTAGCCAACTTTTTACAGCATTTCTACTTTGGGATAATGGGGGAGAAAATGACCGAAAGAGTCCGGAGAATGATGTTCTCAGCCATGCTACGTAATGAAATTGGATGGTACGATGATGAGGAGAACAGTGCCGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTCAGCAACAGACTTTCCATATTTATACAGGACATTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGAGAATAGCTCTTGTGGCATTAGCAACACTTCCAGTTCTCTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGTTTTTCAAGGGGAATACAGGAAATGCACCGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACCGTTGTTGCATTTTGTGCTGGTAACAAGGTTATGGAACTCTACAGGCTGCAGTTAAATAAAATATTTAAGCAGAGCTTTCTTCATGGGTTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTCTGGTACACTGCAATATGTATAAAAAACAGTTATGTAGCTGCACCTACTGCCCTCAAGGAGTACATTGTTTTTTCATTTGCTACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTCAAGCGACGTAAATCTCTCATTTCAGTGTTTGAAATTATAGACCGGGTGCCTAAAATTGATCCTGATGATAACTCAGCCTTGAAGCCACCTAATGTATATGGAAGCATCGAGTTGAAAAATGTTGATTTTTGTTATCCTACTCGGCCAGAAGTGCTGGTATTAAGCAATTTCAGTCTCAAAGTCAGTGGAGGCCAAACAATTGCTGTTGTGGGAGTTTCAGGGTCAGGGAAGAGTACTATAATATCTTTGATGGAGAGATATTACGATCCAGTTGCTGGCCAAGTTTTACTGGATGGGAGGGATTTAAAACTGTATAATCTGAAATGGCTCAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCAGTTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCTAGACATAATGCCAGTGAAGCTGAAATGAAAGAGGCCGCAAGAATAGCTAATGCTCATCATTTCATCAGTAGCCTGCCTCATGGTTATGACACTCATGTTGGAATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAATGCACCTATCTTGTTGTTGGATGAAGCTAGCTCATCAATTGAATCAGAGTCAAGCCGAGTAGTGCAAGAGGCTCTAGACACTCTGATAATGGGAAACAAGACCACTATTTTAATAGCTCACAGGGCTGCCATGATGAGGCATGTGGACAATATAGTTGTACTTAATGGAGGACGGATAGTGGAAGAGGGGACCCATGATTCATTGATGGCTAAGAATGGTCTGTATGTCCGATTAATGCAACCTCATTTTGGTAAAGGTTTGCGTCAGCATCGGCTTGTTTAG 4281 0.42 MMGSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYMDLGAETSASQQMEAEEEMEEMEDIEPPPASVPFSQLFACADRFDWFLMVVGSVAAAAHGTALVVYLHYFAKVIQVPQYPQKDQFHRFKELALTIVYIAGGVFVAGWIGKLIMKNEFLLLVESKFPAVLIFLSCLIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLSAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFDHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTADQIEEAAKIAHAHTFISSLDKGYDTQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHEELLTLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEKDSSESHSCKEPSSPRMMKSPSLQRISAVFRPSDGFFNLQDSPQVQSPPPEKMMENGQSLDSTEKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDEFSVKMNETKDARHRDQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIGLVVTTYYRIDATHHLRGEIDKWCLLIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWYDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAVIVAFLIGVLLHWRIALVALATLPVLCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGLAIGFAFGFSQFLLFACNALLLWYTAICIKNSYVAAPTALKEYIVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTIAVVGVSGSGKSTIISLMERYYDPVAGQVLLDGRDLKLYNLKWLRSHLGLVQQEPVIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMAKNGLYVRLMQPHFGKGLRQHRLV* 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0111 1426 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 405 - -
Tpr1g0111 1426 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1177 1414 IPR003439 GO:0005524
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 731 752 - -
Tpr1g0111 1426 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 161 397 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0111 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1166 1413 IPR027417 -
Tpr1g0111 1426 SMART AAA_5 1204 1391 IPR003593 -
Tpr1g0111 1426 SMART AAA_5 457 636 IPR003593 -
Tpr1g0111 1426 Coils Coil 276 296 - -
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 731 819 - -
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 685 711 - -
Tpr1g0111 1426 Pfam ABC transporter transmembrane region 858 1109 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0111 1426 Pfam ABC transporter transmembrane region 161 380 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0111 1426 Pfam ABC transporter 451 595 IPR003439 GO:0005524
Tpr1g0111 1426 Pfam ABC transporter 1195 1343 IPR003439 GO:0005524
Tpr1g0111 1426 Gene3D ABC transporter type 1, transmembrane domain 795 1018 IPR036640 GO:0005524|GO:0016021
Tpr1g0111 1426 Gene3D ABC transporter type 1, transmembrane domain 1128 1174 IPR036640 GO:0005524|GO:0016021
Tpr1g0111 1426 Gene3D ABC transporter type 1, transmembrane domain 70 676 IPR036640 GO:0005524|GO:0016021
Tpr1g0111 1426 PANTHER ABC TRANSPORTER B FAMILY 161 1423 - -
Tpr1g0111 1426 PANTHER ABC TRANSPORTER B FAMILY 19 142 - -
Tpr1g0111 1426 CDD ABC_6TM_Pgp_ABCB1_D2_like 849 1160 - -
Tpr1g0111 1426 Gene3D - 1175 1414 IPR027417 -
Tpr1g0111 1426 SUPERFAMILY ABC transporter transmembrane region 71 405 IPR036640 GO:0005524|GO:0016021
Tpr1g0111 1426 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 142 - -
Tpr1g0111 1426 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 161 1423 - -
Tpr1g0111 1426 SUPERFAMILY ABC transporter transmembrane region 841 1162 IPR036640 GO:0005524|GO:0016021
Tpr1g0111 1426 Gene3D - 420 667 IPR027417 -
Tpr1g0111 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 664 IPR027417 -
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 777 819 - -
Tpr1g0111 1426 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 430 665 IPR003439 GO:0005524
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 18 49 - -
Tpr1g0111 1426 Coils Coil 39 59 - -
Tpr1g0111 1426 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 854 1101 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr1g0111 1426 MobiDBLite consensus disorder prediction 753 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0111 Tpr-Chr1 964161 973558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0111 60 723 Calmodulin-binding Proteins AT2G36910 41.654 1.14e-155 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0111 K05658 - gmx:100799399 2497.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0111 1 964161 973558 Tpr1g0111 1 964161 973558 ECH