Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0105 ATGGCACGAGAAATATTGATTCTTAGAAGGCTTGATCATCCCAATATCATTAAACTGGAAGGCTTGATTACTTCAAGATTGTCTTGTAGCATCTACCTTGTATTTGAGTACATGGAGCATGATGTTAAATGGCTCTTGTCAAAACCAGAAATCAACTTTACTGAATCACAGATCAAATGCTACATGAAACAGTTGTTATCTGGTCTTGAGCACTGTCACTCAAGGGGTGTAATGCACCGGGACATTAAAGGGTCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTAGCAGATTTTGGATTGGCGAATGTCTGTAGTTACGGGAACAAGCAGCCACTAACTAGTCGCGTTGTCACGTTATGGTACCGTCCTCCAGAACTTTTGTTTGGTTCAACAGATTATGGTCCATCTGTGGATATTTGGAGTGTTGGTTGTGTCTTTGCAGAGTTACTAGTTGGGAAGCCTATACTTAAGGGAAGAACAGAGGTAGTAATACCTATCTTTTCAAAATGTATGCACTTTTCTCCTTCCCAAAATTCAGCAAAATGGATGTAA 558 0.3943 MAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDVKWLLSKPEINFTESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANVCSYGNKQPLTSRVVTLWYRPPELLFGSTDYGPSVDIWSVGCVFAELLVGKPILKGRTEVVIPIFSKCMHFSPSQNSAKWM* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0105 185 Gene3D Transferase(Phosphotransferase) domain 1 38 164 - -
Tpr1g0105 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Tpr1g0105 185 PANTHER CELL DIVISION PROTEIN KINASE 1 165 - -
Tpr1g0105 185 Gene3D Phosphorylase Kinase; domain 1 2 37 - -
Tpr1g0105 185 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0105 185 PANTHER PROTEIN IMPAIRED IN BABA-INDUCED STERILITY 1 1 165 - -
Tpr1g0105 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0105 185 Pfam Protein kinase domain 2 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0105 185 SUPERFAMILY Protein kinase-like (PK-like) 2 166 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0105 Tpr-Chr1 934285 935296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0105 3 163 Core Cell Cycle Gene Families AT5G64960 57.143 2.47e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr1g0105 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0105 - - adu:107468284 305.449