Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0082 ATGGCTTTAAGTTCTATTAAAGGCTTTGTTTGGTTGCTATTGATAACATGTATGATTGGGATAAGTTCAGCTCAATTATCCAATGAAATGTTCTATGCCAAAACGTGTCCAAAAGCACTTCGTACAATTAGGAAAACAGTGCAAGATGTTGTCAAGAATGAGAAACGAATGGGAGCATCCTTGCTCCGTCTCTTTTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTATTGTTAGACGACACCTCAAATTTTACAGGTGAAAAGAATTCATTCCCAAATGCAAACTCTCTAAGGGGTTTTGAGGTAATTGATGACATCAAATCTCAATTGGAGACTATGTGTCCCGAAGTTGTATCTTGTGCTGATATCTTAGCCCTTGCTGCCAGGGACGCTGTTGCTGAGCTTGGTGGACAAAGATGGAGTGTACCATTAGGCAGAAGAGACTCGTTAACAGCAAGCTTAGAACTAGCAAATTCTGACTTACCTGCTCCCTTTTTGGATCTTGATGGCCTTATCGCTGGATTTCAAAAGAAAAATTTCACAGCCGAAGAAATGGTTACATTATCAGGTGCTCACACAATAGGGCAAGTGAGGTGCTTCTTTTTCAGAGCAAGAGTATACAATGAAACAAACATAGACCCAACATTTGCTGCAGAAATGCAAGCAGCTTGTCCTTTTGAAGGGGGTGATAGCAATTTATCACCTTTCGATTCCTCCACACCAAATAATTTTGACAATGCTTTCTATTCCAACTTAGTGAAAAATAAAGGTCTAGTACATTCTGATCAACAACTATTTGGTAATGGATCATCAACAAATGCTCAAGTAAGATCATATAGTAGAAACATGGGACGTTTCAAAAAAGATTTTGCAGATGCAATGTTTAAGATGACATTGCTTACTCCACTTACTGGAACTGATGGTGAGATTAGGCAAAACTGCAGGGTTATCAATGCTCCATCAAACACTACCACCACTGCTTAA 990 0.3909 MALSSIKGFVWLLLITCMIGISSAQLSNEMFYAKTCPKALRTIRKTVQDVVKNEKRMGASLLRLFFHDCFVQGCDASVLLDDTSNFTGEKNSFPNANSLRGFEVIDDIKSQLETMCPEVVSCADILALAARDAVAELGGQRWSVPLGRRDSLTASLELANSDLPAPFLDLDGLIAGFQKKNFTAEEMVTLSGAHTIGQVRCFFFRARVYNETNIDPTFAAEMQAACPFEGGDSNLSPFDSSTPNNFDNAFYSNLVKNKGLVHSDQQLFGNGSSTNAQVRSYSRNMGRFKKDFADAMFKMTLLTPLTGTDGEIRQNCRVINAPSNTTTTA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0082 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Tpr1g0082 329 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 SUPERFAMILY Heme-dependent peroxidases 31 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 ProSiteProfiles Plant heme peroxidase family profile. 31 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tpr1g0082 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 Gene3D - 31 317 - -
Tpr1g0082 329 PANTHER PEROXIDASE 72-RELATED 1 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 Gene3D Peroxidase, domain 2 164 299 - -
Tpr1g0082 329 PANTHER PEROXIDASE 1 324 - -
Tpr1g0082 329 CDD secretory_peroxidase 31 319 IPR033905 GO:0004601|GO:0042744
Tpr1g0082 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g0082 329 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0082 Tpr-Chr1 758964 760978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0082 21 316 Peroxidase AT5G05340 56.040 5.01e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0082 K00430 - gmx:100802244 488.419