Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0073 ATGAATATCCGAAGCATAGCAATGTCATTCGGGGGAGGTCACCGCGTTGCAACCCTCCGTCGCTGGACGCTGCATACAGTTTTCAACTTCTCCACTCTCCACAATTTTTTGCCATGGTTGGAGAACAAAGCTGCTTCCACCATCTCTTCTTCCCTTTCCATTGCTAATTCTTCTTCATACGGTAACTCCTTGTTTGCTTCCAACTCAATTCAAACCGGTGATTGCATTTTACACGTTCCTTACTCTGTGCAAATAACTCCGGATAATCTCCCTCCTCAAATCAGATCTTTGATCACTGAAGATGTTGGTAATGTTGCAAAACTTGCCATTGTTCTTCTAATTCACAAGAATTTGGGTCAGGACTCCGAATGGTATCCTTATATTAGCTGTCTTCCCCCGCAAGCGGAGATGCATAATACGATATTTTGGAATGAAAGTGAGTTGGAGATGATTCGTCAAAGTTCTGTTTATGAGGAAACTATTTACCAAAAGTCTCAAATCGAAAAGGACTTTATGGCAATCAGGCCTGTTTTCAAATCATTTTGTCAAAGTTTTGGAGATTTTACCTGCAAGGACTTCATGCACGCATGCGCACAAGATTTCTTAAATCATGATGGGACTTCAGAAGCAATTGTAATGAGTGATGACAACAAGCAATGCTCAGAAGTTATCGCTGACTGTGATTATGTTCCTGGTGAACAGGTACTTATAAGATATGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCATACAACATTTATGATCAGGTTCAGATTCAGTGTGATATACCTAAGCTAGATCCTCTGCGTGACATTAAATTAGAACTCTTGCAGCAATACTTTGTGCCTCCAACCAAAGTGGAGAAGGGCTTGAAGTATTCTGTGAATTCCTTCACAATCAAGGAGGTGAAGTCTGCTGGAGGGAAAGGGAAGGGTGTGCCACAATCACTTCGTGCACTTGCTCGTGTTCTTACTTGTACCACGCCTCAGGAGCTTAACTATCTGGTCATGGAGGCTGCGCAAACTGATGGTAGGCTGGCTAGACGCTCTTTACAGGATATGAACAGAGAGATACAAGCACACAAGATATTATCCTCATTATTCATCCAATTAATTGAGGAGCGCAATGCAACTATTACATCATTAGATTCTTGCGATTCTTCATCCTTGGGCGAAAGACTTCCTATTAGAAGACAAATGGCTCAAGATCTCCTACATGGGGAGCTTCGCATTCTGAAATCCGCTTCTGCCTGGCTGGAGAACTACTGTTTTTCCTTGACTTGA 1302 0.4194 MNIRSIAMSFGGGHRVATLRRWTLHTVFNFSTLHNFLPWLENKAASTISSSLSIANSSSYGNSLFASNSIQTGDCILHVPYSVQITPDNLPPQIRSLITEDVGNVAKLAIVLLIHKNLGQDSEWYPYISCLPPQAEMHNTIFWNESELEMIRQSSVYEETIYQKSQIEKDFMAIRPVFKSFCQSFGDFTCKDFMHACAQDFLNHDGTSEAIVMSDDNKQCSEVIADCDYVPGEQVLIRYGKFSNATLMLDFGFTIPYNIYDQVQIQCDIPKLDPLRDIKLELLQQYFVPPTKVEKGLKYSVNSFTIKEVKSAGGKGKGVPQSLRALARVLTCTTPQELNYLVMEAAQTDGRLARRSLQDMNREIQAHKILSSLFIQLIEERNATITSLDSCDSSSLGERLPIRRQMAQDLLHGELRILKSASAWLENYCFSLT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0073 433 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 31 427 - -
Tpr1g0073 433 Pfam SET domain 63 240 IPR001214 GO:0005515
Tpr1g0073 433 PANTHER OS01G0976450 PROTEIN 31 427 - -
Tpr1g0073 433 Pfam Rubisco LSMT substrate-binding 271 418 IPR015353 -
Tpr1g0073 433 Gene3D set domain protein methyltransferase, domain 1 24 253 - -
Tpr1g0073 433 Gene3D - 256 428 IPR036464 -
Tpr1g0073 433 SUPERFAMILY SET domain 33 258 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr1g0073 SET 3.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0073 K19199 - gmx:100818002 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0073 1 674554 680699 Tpr1g0073 1 674554 680699 ECH