Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0054 ATGAATATTCATCATATAAGAATGATGGCTATAACATCGTCATTACCAACCAATAATAATAGCTTGTTCTCAGTCTCAGCAAGGCCACAACTTTTGGTTACTTCTTCTCTTTCTTTCATTTCCACAACTTCCATCCATTTCCATAATTATTCATTTCATAATAAGCTTCACCTTCGGAGGCAGCTTAATTCTGTTAGAAAATTGAGTCGAGTTCCCGCGCCAACGATAGCCATGACAAAGGTGCAAGAAGTTCTACCACCACCTCTTACTTCAACTTCACCTCCACCTTCCTTATTTGATGGAACTACCAGGTTGTACATCTCCTACAAATGCCCCTATGCTCAGCGTGTATGGATCGCCCGTAACTCTAAGGGATTGCAGGACAAGATAGAGTTGGTTCCTATTGATCTGCAAGACAGGCCTTCCTGGTATAAGGACAAAGTCTACCCAGCCAACAAGGTTCCATCTCTAGAACACAATAATGAAGTTAGAGGAGAGAGTCTTGATCTGATTAAATATATTGACACTCACTTTGAAGGCCCCTCCCTTTTCCCTACTGTTCCTGATGATAAGGAGTTTGCTGAAAAGTTGCTATCTTACACGGATACATTCTACAAGACCGTAGTTTCTTCGTTTAAAGGAGGAGATGTGACTGAGGCTGGCACTGCATTTGATTACCTTGAGACTGTTCTCTCCAAACATGATAATGGACCTTTCTTCCTTGGCCAATTCAGTCTGGTGGATATAGCATATGCTCCTTTCATAGAAAGATTTCAACCGTTTTTAAGGGATGTGAAAAATTATGACATTACAATAGGCAGGCCTAAACTGGCAGCATGGATTGAGGGAATAAACAACATTGAAGGCTACAAAATAACCCGTTCTGATCCTAAGGAGCTTGTTGAAAGTTACAAGAAGCGCTTCCTGGCCAATCCATGA 939 0.4121 MNIHHIRMMAITSSLPTNNNSLFSVSARPQLLVTSSLSFISTTSIHFHNYSFHNKLHLRRQLNSVRKLSRVPAPTIAMTKVQEVLPPPLTSTSPPPSLFDGTTRLYISYKCPYAQRVWIARNSKGLQDKIELVPIDLQDRPSWYKDKVYPANKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLFPTVPDDKEFAEKLLSYTDTFYKTVVSSFKGGDVTEAGTAFDYLETVLSKHDNGPFFLGQFSLVDIAYAPFIERFQPFLRDVKNYDITIGRPKLAAWIEGINNIEGYKITRSDPKELVESYKKRFLANP* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0054 312 PANTHER GLUTATHIONE S-TRANSFERASE L1 45 309 IPR044629 GO:0004364
Tpr1g0054 312 SUPERFAMILY Thioredoxin-like 95 183 IPR036249 -
Tpr1g0054 312 Pfam Glutathione S-transferase, N-terminal domain 105 181 IPR004045 -
Tpr1g0054 312 Pfam Glutathione S-transferase, C-terminal domain 217 282 - -
Tpr1g0054 312 Gene3D - 180 311 - -
Tpr1g0054 312 SUPERFAMILY GST C-terminal domain-like 178 308 IPR036282 -
Tpr1g0054 312 Gene3D Glutaredoxin 76 179 - -
Tpr1g0054 312 SFLD Glutathione Transferase (cytosolic) 105 282 IPR040079 -
Tpr1g0054 312 CDD GST_C_Lambda 188 305 - -
Tpr1g0054 312 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 160 308 IPR010987 -
Tpr1g0054 312 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 101 182 IPR004045 -
Tpr1g0054 312 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 45 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0054 Tpr-Chr1 550322 553362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0054 69 310 Glutathione S-transferase Gene Family AT3G55040 63.636 1.08e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0054 K00799 - ming:122093307 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0054 1 550322 553362 Tpr1g0054 1 550322 553362 ECH