Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0048 ATGCAGTTCAGGGAATCTGGCCACAATCTTGACGAGTTGGAGCGTAAGACTGTAAAGAGGAAAAGGGGTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTAAGCAATTGAGTGAAGAAATTCCTTATGAGCGTGTTATCGAATCAGATTCTACATCGACAGAGGATCTGATCACTTACAACATCATCCCTATAGATGCTACTTCTTCAACAAATGCTATTGTCTTTTTTCCTGAGGTGCAAGCAGCAGTTTCAGCTCTCAAGTATTTCAGTGCCTTTGCCTAA 285 0.4105 MQFRESGHNLDELERKTVKRKRGFATLKVLGTVLKQLSEEIPYERVIESDSTSTEDLITYNIIPIDATSSTNAIVFFPEVQAAVSALKYFSAFA* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0048 94 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 92 - -
Tpr1g0048 94 PANTHER BNAC03G35120D PROTEIN 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0048 Tpr-Chr1 493627 495083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0048 2 92 Cell Wall Biosynthesis AT3G07160 67.742 5.82e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0048 K11000 - gmx:100811473 132.88