Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0011 ATGGGTTGTTTTTCGTGTTTCGATTCCAAGGAGGATGAGAAGCTCAATCCAAATCCACAGCAGCAGCAACAACAAACCCATCATCACGATCATAATCTCCCCTCTCATGTTTCCAGATTGCCATCTGCACCCTCTGGACCAGACAAACTGCGGTCAACAAGTAACGGAGGAGCATCCAAAAGGGAATTCACTGCTGCTCTCAAAGATGGACCGCCCGCCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCTGCTGCAACCAAAAATTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAGGGACGCCTCGAATCTACGGGTCAGGCTGTTGCTGTTAAGCAGTTAGACAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTCGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAACCTTGTCAGTCTCATTGGATACTGTGCGGATGGGGACCAACGCCTCCTAGTTTATGAATTTATGCCCTTGGGATCATTGGAAGACCACCTTCACGATCTCCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCCAATCCTCCAGTAATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCACCCTAAGCTTTCTGACTTTGGTCTGGCGAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTAAAATCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCACGGAGAACAAAACCTTGTTACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTCCAAAGTTGGCAGATCCACGATTGCAGGGTCGGTACCCCATGCGGGGTCTTTATCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTAGCCAACCAGTCACATGACACTAACAATGCCGGCATTGGTAATAATAAGGGAACTGGTGATGATAAAAGGAGTAGAGATGATAAAGGCGGAAGAATATTACAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGAGTCCCCACGTGAAACTGCGAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAGAAAAGACGGCAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1410 0.4745 MGCFSCFDSKEDEKLNPNPQQQQQQTHHHDHNLPSHVSRLPSAPSGPDKLRSTSNGGASKREFTAALKDGPPAQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLESTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQSHDTNNAGIGNNKGTGDDKRSRDDKGGRILQNDEGGGSGRRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDASNA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0011 469 Gene3D Transferase(Phosphotransferase) domain 1 169 390 - -
Tpr1g0011 469 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g0011 469 SUPERFAMILY Protein kinase-like (PK-like) 75 366 IPR011009 -
Tpr1g0011 469 MobiDBLite consensus disorder prediction 387 402 - -
Tpr1g0011 469 MobiDBLite consensus disorder prediction 377 435 - -
Tpr1g0011 469 PANTHER OS07G0668900 PROTEIN 2 400 - -
Tpr1g0011 469 PANTHER OS07G0668900 PROTEIN 422 461 - -
Tpr1g0011 469 MobiDBLite consensus disorder prediction 8 57 - -
Tpr1g0011 469 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Tpr1g0011 469 Gene3D Phosphorylase Kinase; domain 1 76 168 - -
Tpr1g0011 469 CDD STKc_IRAK 98 366 - -
Tpr1g0011 469 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 2 400 - -
Tpr1g0011 469 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 422 461 - -
Tpr1g0011 469 MobiDBLite consensus disorder prediction 410 435 - -
Tpr1g0011 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Tpr1g0011 469 Pfam Protein kinase domain 95 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0011 Tpr-Chr1 128302 132738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0011 1 457 Glycoside Hydrolase AT3G07070 56.087 6.23e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr1g0011 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0011 K13430 - gmx:100777987 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0011 1 128302 132738 Tpr1g3974 1 44487720 44492825 ECH
Tpr1g0011 1 128302 132738 Tpr1g0011 1 128302 132738 ECH