Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g0003 ATGTCTCTAGAGTATGCGATGGAAGGACAACTTTCAGTGAAGTCTGATGTATACAGCTTTGGAGTTTTGCTGCTAGAGATTATTACAGGCAAAAAGAACAGCGTTCAATATGAAGACTATGAATCCACAACTTTAGTTGGACAGATATGGAATCTATGGAGAGAAGGCAAAGCCATGGAGATTATTGATGAATCATTAGGAGAGTCATTCTCTGAGCATGAAGTTGAAAGATGCATCCAAATAGGACTTTTATGTGTACAAGATTTTGCTATTGACAGACCATCTATGTCAGCTGTTGTTTCTATGTTGGGAAATGACTCAACTCTTCCTACTCCAAAACAACCAGCATTTATTTTCAAGAAAGGTAATTATGACGGTTCAAATCCATCAACCAGTGAAGGAATTCACTCACTAAATGATGCAAGTATGACTATGATTGAAGCTCGCTAA 450 0.3756 MSLEYAMEGQLSVKSDVYSFGVLLLEIITGKKNSVQYEDYESTTLVGQIWNLWREGKAMEIIDESLGESFSEHEVERCIQIGLLCVQDFAIDRPSMSAVVSMLGNDSTLPTPKQPAFIFKKGNYDGSNPSTSEGIHSLNDASMTMIEAR* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g0003 149 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Tpr1g0003 149 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 144 - -
Tpr1g0003 149 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Tpr1g0003 149 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 1 144 - -
Tpr1g0003 149 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g0003 Tpr-Chr1 37934 38934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g0003 1 149 Receptor kinase-like Gene Family AT3G45860 46.835 1.05e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g0003 PK_Tyr_Ser-Thr 4.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g0003 - - gmx:100812814 244.973