Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc9g00047 CTCAATGACGCTGTTTCGTGGCCTCCTCTTCTCATGATCCCTGCTTCTGCAAAATGCAAACCTCTTCTCATAGATCTCTGCTTTTGCAAAACGCACCAAACCAAAGAGAGCAATCTTGAAACCCCAAGGCGGGGCATTATGCTTTCTTGGCTTCAGTATACACAAGGCCAGGATCAATACTTGCGTTGGCAGCTGTTGATGCATAATGCATTTGCTAAGGGTGATTATGCACGGGTGGACAGACGTATTGGACAGTTTGCAGGAGCTGCACAGTCTCTTGGTGCTGTTGCTATCTTGGTGAATCCATGGAACGTCACAGAGGTTGCTGCTTCTATTTGTTATGCATTGGATATGCCAGCTGATGAAAGAGAAAAACGGCATCTAGTTAACTTCAAGCATGTGACAACTCACACTTCACAAGAATGGGCAGCAACTTTTGTGAGTGCACTGAATGATACGATTGTTGAAAGCCCAGCTTAG 480 0.4562 LNDAVSWPPLLMIPASAKCKPLLIDLCFCKTHQTKESNLETPRRGIMLSWLQYTQGQDQYLRWQLLMHNAFAKGDYARVDRRIGQFAGAAQSLGAVAILVNPWNVTEVAASICYALDMPADEREKRHLVNFKHVTTHTSQEWAATFVSALNDTIVESPA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc9g00047 159 Gene3D Glycogen Phosphorylase B; 80 135 - -
Stsc9g00047 159 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 85 156 IPR001830 GO:0003824|GO:0005992
Stsc9g00047 159 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 85 154 - -
Stsc9g00047 159 Pfam Glycosyltransferase family 20 85 151 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc9g00047 Stsc-Chr9 310533 313330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc9g00047 83 157 Trehalose Biosynthesis Gene Families AT1G78580 73.333 1.41e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc9g00047 K16055 - cave:132170821 132.494